Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
LITAFQ99732 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC12.96□□□□□ -0.33
LITAFQ99732 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
LITAFQ99732 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LITAFQ99732 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC12.96□□□□□ -0.33
LITAFQ99732 SERP1-208ENST00000491660 830 ntTSL 2 BASIC12.96□□□□□ -0.33
LITAFQ99732 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC12.96□□□□□ -0.33
LITAFQ99732 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC12.96□□□□□ -0.33
LITAFQ99732 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC12.96□□□□□ -0.33
LITAFQ99732 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LITAFQ99732 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
LITAFQ99732 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC12.96□□□□□ -0.33
LITAFQ99732 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.34
LITAFQ99732 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
LITAFQ99732 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC12.96□□□□□ -0.34
LITAFQ99732 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LITAFQ99732 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LITAFQ99732 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LITAFQ99732 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LITAFQ99732 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LITAFQ99732 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LITAFQ99732 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LITAFQ99732 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC12.95□□□□□ -0.34
LITAFQ99732 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LITAFQ99732 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LITAFQ99732 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LITAFQ99732 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC12.95□□□□□ -0.34
LITAFQ99732 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LITAFQ99732 PGM5P4-201ENST00000421970 445 ntBASIC12.95□□□□□ -0.34
LITAFQ99732 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC12.95□□□□□ -0.34
LITAFQ99732 AL031963.3-201ENST00000606441 850 ntBASIC12.95□□□□□ -0.34
LITAFQ99732 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LITAFQ99732 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC12.95□□□□□ -0.34
LITAFQ99732 KRT87P-202ENST00000534226 1464 ntBASIC12.95□□□□□ -0.34
LITAFQ99732 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC12.95□□□□□ -0.34
LITAFQ99732 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LITAFQ99732 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LITAFQ99732 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC12.95□□□□□ -0.34
LITAFQ99732 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LITAFQ99732 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LITAFQ99732 EML3-212ENST00000494176 2901 ntTSL 2 BASIC12.95□□□□□ -0.34
LITAFQ99732 EML3-216ENST00000529309 2909 ntTSL 2 BASIC12.95□□□□□ -0.34
LITAFQ99732 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LITAFQ99732 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LITAFQ99732 STX6-204ENST00000542060 4809 ntTSL 2 BASIC12.95□□□□□ -0.34
LITAFQ99732 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC12.95□□□□□ -0.34
LITAFQ99732 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LITAFQ99732 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC12.94□□□□□ -0.34
LITAFQ99732 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC12.94□□□□□ -0.34
LITAFQ99732 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC12.94□□□□□ -0.34
LITAFQ99732 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LITAFQ99732 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
LITAFQ99732 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LITAFQ99732 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LITAFQ99732 AC010141.2-201ENST00000452426 721 ntBASIC12.94□□□□□ -0.34
LITAFQ99732 TRIR-202ENST00000588213 841 ntTSL 3 BASIC12.94□□□□□ -0.34
LITAFQ99732 AL358852.1-201ENST00000623174 1268 ntBASIC12.94□□□□□ -0.34
LITAFQ99732 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
LITAFQ99732 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC12.94□□□□□ -0.34
LITAFQ99732 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC12.94□□□□□ -0.34
LITAFQ99732 PHGDH-210ENST00000641115 1638 ntBASIC12.94□□□□□ -0.34
LITAFQ99732 AC087633.2-202ENST00000565166 1439 ntBASIC12.94□□□□□ -0.34
LITAFQ99732 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LITAFQ99732 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LITAFQ99732 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LITAFQ99732 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
LITAFQ99732 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC12.94□□□□□ -0.34
LITAFQ99732 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC12.94□□□□□ -0.34
LITAFQ99732 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC12.93□□□□□ -0.34
LITAFQ99732 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LITAFQ99732 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LITAFQ99732 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LITAFQ99732 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LITAFQ99732 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LITAFQ99732 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms