Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC38A3Q99624 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC38A3Q99624 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC38A3Q99624 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC38A3Q99624 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SLC38A3Q99624 AL162377.1-201ENST00000618844 1793 ntBASIC18.86■□□□□ 0.61
SLC38A3Q99624 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC38A3Q99624 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SLC38A3Q99624 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC38A3Q99624 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC38A3Q99624 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
SLC38A3Q99624 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC38A3Q99624 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC38A3Q99624 MIR1224-201ENST00000408193 85 ntBASIC18.85■□□□□ 0.61
SLC38A3Q99624 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.85■□□□□ 0.61
SLC38A3Q99624 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.85■□□□□ 0.61
SLC38A3Q99624 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.85■□□□□ 0.61
SLC38A3Q99624 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC38A3Q99624 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.85■□□□□ 0.61
SLC38A3Q99624 AC097488.1-201ENST00000507834 756 ntBASIC18.85■□□□□ 0.61
SLC38A3Q99624 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC38A3Q99624 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
SLC38A3Q99624 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC38A3Q99624 AC011298.2-201ENST00000617989 482 ntBASIC18.85■□□□□ 0.61
SLC38A3Q99624 AC005363.2-201ENST00000618631 242 ntBASIC18.85■□□□□ 0.61
SLC38A3Q99624 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC38A3Q99624 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.85■□□□□ 0.61
SLC38A3Q99624 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SLC38A3Q99624 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC38A3Q99624 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.85■□□□□ 0.61
SLC38A3Q99624 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC38A3Q99624 AC092667.1-201ENST00000434301 2586 ntBASIC18.85■□□□□ 0.61
SLC38A3Q99624 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC38A3Q99624 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC38A3Q99624 CYP2D8P-201ENST00000433633 1490 ntBASIC18.84■□□□□ 0.61
SLC38A3Q99624 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC38A3Q99624 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC38A3Q99624 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC38A3Q99624 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC38A3Q99624 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC38A3Q99624 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC38A3Q99624 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC38A3Q99624 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC38A3Q99624 CRYGFP-201ENST00000418459 633 ntBASIC18.84■□□□□ 0.61
SLC38A3Q99624 AC004951.3-201ENST00000418645 1148 ntBASIC18.84■□□□□ 0.61
SLC38A3Q99624 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC38A3Q99624 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SLC38A3Q99624 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.84■□□□□ 0.61
SLC38A3Q99624 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC38A3Q99624 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC38A3Q99624 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SLC38A3Q99624 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC38A3Q99624 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SLC38A3Q99624 RCC2P6-201ENST00000526625 1557 ntBASIC18.84■□□□□ 0.61
SLC38A3Q99624 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC38A3Q99624 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC38A3Q99624 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SLC38A3Q99624 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC38A3Q99624 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC38A3Q99624 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SLC38A3Q99624 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC38A3Q99624 KRT18P22-201ENST00000402024 1347 ntBASIC18.83■□□□□ 0.61
SLC38A3Q99624 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SLC38A3Q99624 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
SLC38A3Q99624 RCN1P1-201ENST00000400413 996 ntBASIC18.83■□□□□ 0.6
SLC38A3Q99624 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC38A3Q99624 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC38A3Q99624 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.83■□□□□ 0.6
SLC38A3Q99624 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.83■□□□□ 0.6
SLC38A3Q99624 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.83■□□□□ 0.6
SLC38A3Q99624 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.83■□□□□ 0.6
SLC38A3Q99624 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC38A3Q99624 C2orf69P3-201ENST00000565542 1120 ntBASIC18.83■□□□□ 0.6
SLC38A3Q99624 SLC25A1P4-201ENST00000567977 778 ntBASIC18.83■□□□□ 0.6
SLC38A3Q99624 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SLC38A3Q99624 AC130371.2-201ENST00000619443 611 ntBASIC18.83■□□□□ 0.6
SLC38A3Q99624 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SLC38A3Q99624 AC009237.14-201ENST00000609975 1594 ntBASIC18.83■□□□□ 0.6
SLC38A3Q99624 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC38A3Q99624 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC38A3Q99624 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC38A3Q99624 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC38A3Q99624 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SLC38A3Q99624 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC38A3Q99624 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC38A3Q99624 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC38A3Q99624 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC38A3Q99624 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SLC38A3Q99624 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC38A3Q99624 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SLC38A3Q99624 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC38A3Q99624 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC38A3Q99624 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SLC38A3Q99624 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SLC38A3Q99624 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC38A3Q99624 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC38A3Q99624 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.82■□□□□ 0.6
SLC38A3Q99624 AC010947.1-201ENST00000623454 693 ntBASIC18.82■□□□□ 0.6
SLC38A3Q99624 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC38A3Q99624 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms