Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CCL13Q99616 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CCL13Q99616 AL158211.5-201ENST00000623583 2518 ntBASIC16.32■□□□□ 0.2
CCL13Q99616 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL13Q99616 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.31■□□□□ 0.2
CCL13Q99616 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCL13Q99616 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL13Q99616 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CCL13Q99616 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
CCL13Q99616 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.31■□□□□ 0.2
CCL13Q99616 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL13Q99616 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.31■□□□□ 0.2
CCL13Q99616 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CCL13Q99616 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCL13Q99616 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL13Q99616 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CCL13Q99616 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCL13Q99616 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL13Q99616 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL13Q99616 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCL13Q99616 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.31■□□□□ 0.2
CCL13Q99616 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.31■□□□□ 0.2
CCL13Q99616 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CCL13Q99616 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.31■□□□□ 0.2
CCL13Q99616 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCL13Q99616 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.31■□□□□ 0.2
CCL13Q99616 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.31■□□□□ 0.2
CCL13Q99616 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.31■□□□□ 0.2
CCL13Q99616 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.31■□□□□ 0.2
CCL13Q99616 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCL13Q99616 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL13Q99616 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL13Q99616 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.31■□□□□ 0.2
CCL13Q99616 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL13Q99616 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCL13Q99616 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL13Q99616 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.31■□□□□ 0.2
CCL13Q99616 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CCL13Q99616 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL13Q99616 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL13Q99616 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL13Q99616 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL13Q99616 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL13Q99616 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL13Q99616 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL13Q99616 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCL13Q99616 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL13Q99616 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
CCL13Q99616 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL13Q99616 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL13Q99616 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL13Q99616 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL13Q99616 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.3■□□□□ 0.2
CCL13Q99616 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL13Q99616 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.3■□□□□ 0.2
CCL13Q99616 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CCL13Q99616 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL13Q99616 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL13Q99616 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CCL13Q99616 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL13Q99616 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL13Q99616 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL13Q99616 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL13Q99616 KRT8P8-201ENST00000434750 1448 ntBASIC16.29■□□□□ 0.2
CCL13Q99616 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL13Q99616 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL13Q99616 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL13Q99616 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL13Q99616 TREX1-205ENST00000625293 1783 ntBASIC16.29■□□□□ 0.2
CCL13Q99616 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.29■□□□□ 0.2
CCL13Q99616 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL13Q99616 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL13Q99616 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.29■□□□□ 0.2
CCL13Q99616 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.29■□□□□ 0.2
CCL13Q99616 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.29■□□□□ 0.2
CCL13Q99616 UBE2SP1-201ENST00000450587 669 ntBASIC16.29■□□□□ 0.2
CCL13Q99616 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.29■□□□□ 0.2
CCL13Q99616 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL13Q99616 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL13Q99616 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.29■□□□□ 0.2
CCL13Q99616 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CCL13Q99616 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL13Q99616 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL13Q99616 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL13Q99616 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL13Q99616 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL13Q99616 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.28■□□□□ 0.2
CCL13Q99616 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL13Q99616 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CCL13Q99616 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CCL13Q99616 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.28■□□□□ 0.2
CCL13Q99616 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL13Q99616 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL13Q99616 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCL13Q99616 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CCL13Q99616 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL13Q99616 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL13Q99616 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL13Q99616 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL13Q99616 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms