Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PKP4Q99569 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.95■□□□□ 0.62
PKP4Q99569 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PKP4Q99569 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.95■□□□□ 0.62
PKP4Q99569 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
PKP4Q99569 AC004264.1-201ENST00000608354 794 ntBASIC18.95■□□□□ 0.62
PKP4Q99569 AC110285.5-201ENST00000611501 352 ntBASIC18.95■□□□□ 0.62
PKP4Q99569 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.95■□□□□ 0.62
PKP4Q99569 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PKP4Q99569 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PKP4Q99569 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.95■□□□□ 0.62
PKP4Q99569 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.95■□□□□ 0.62
PKP4Q99569 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PKP4Q99569 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PKP4Q99569 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.95■□□□□ 0.62
PKP4Q99569 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PKP4Q99569 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
PKP4Q99569 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PKP4Q99569 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PKP4Q99569 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PKP4Q99569 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.94■□□□□ 0.62
PKP4Q99569 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PKP4Q99569 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.94■□□□□ 0.62
PKP4Q99569 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.94■□□□□ 0.62
PKP4Q99569 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PKP4Q99569 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PKP4Q99569 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PKP4Q99569 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PKP4Q99569 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.94■□□□□ 0.62
PKP4Q99569 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PKP4Q99569 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.94■□□□□ 0.62
PKP4Q99569 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PKP4Q99569 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.94■□□□□ 0.62
PKP4Q99569 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.94■□□□□ 0.62
PKP4Q99569 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.94■□□□□ 0.62
PKP4Q99569 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.94■□□□□ 0.62
PKP4Q99569 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PKP4Q99569 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.94■□□□□ 0.62
PKP4Q99569 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PKP4Q99569 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PKP4Q99569 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.93■□□□□ 0.62
PKP4Q99569 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PKP4Q99569 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PKP4Q99569 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PKP4Q99569 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PKP4Q99569 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
PKP4Q99569 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.93■□□□□ 0.62
PKP4Q99569 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PKP4Q99569 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
PKP4Q99569 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PKP4Q99569 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.93■□□□□ 0.62
PKP4Q99569 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.93■□□□□ 0.62
PKP4Q99569 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.93■□□□□ 0.62
PKP4Q99569 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.93■□□□□ 0.62
PKP4Q99569 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PKP4Q99569 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.93■□□□□ 0.62
PKP4Q99569 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.93■□□□□ 0.62
PKP4Q99569 AL359736.2-201ENST00000621992 437 ntBASIC18.93■□□□□ 0.62
PKP4Q99569 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.93■□□□□ 0.62
PKP4Q99569 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PKP4Q99569 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PKP4Q99569 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PKP4Q99569 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PKP4Q99569 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PKP4Q99569 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
PKP4Q99569 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.93■□□□□ 0.62
PKP4Q99569 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PKP4Q99569 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PKP4Q99569 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PKP4Q99569 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.92■□□□□ 0.62
PKP4Q99569 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PKP4Q99569 AC093484.2-201ENST00000580996 2166 ntBASIC18.92■□□□□ 0.62
PKP4Q99569 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PKP4Q99569 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PKP4Q99569 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.92■□□□□ 0.62
PKP4Q99569 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PKP4Q99569 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.92■□□□□ 0.62
PKP4Q99569 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
PKP4Q99569 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PKP4Q99569 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PKP4Q99569 KRT16P5-201ENST00000455284 522 ntBASIC18.92■□□□□ 0.62
PKP4Q99569 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.92■□□□□ 0.62
PKP4Q99569 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.92■□□□□ 0.62
PKP4Q99569 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.92■□□□□ 0.62
PKP4Q99569 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PKP4Q99569 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PKP4Q99569 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.92■□□□□ 0.62
PKP4Q99569 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PKP4Q99569 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.92■□□□□ 0.62
PKP4Q99569 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.92■□□□□ 0.62
PKP4Q99569 AC116562.4-201ENST00000641316 2276 ntBASIC18.91■□□□□ 0.62
PKP4Q99569 Z82202.1-201ENST00000623446 1880 ntBASIC18.91■□□□□ 0.62
PKP4Q99569 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PKP4Q99569 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.91■□□□□ 0.62
PKP4Q99569 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PKP4Q99569 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.91■□□□□ 0.62
PKP4Q99569 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.91■□□□□ 0.62
PKP4Q99569 AC098590.1-201ENST00000468126 897 ntBASIC18.91■□□□□ 0.62
PKP4Q99569 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.91■□□□□ 0.62
PKP4Q99569 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms