Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.64■□□□□ 0.25
CITED4Q96RK1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CITED4Q96RK1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CITED4Q96RK1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
CITED4Q96RK1 AL391005.1-201ENST00000623953 2435 ntBASIC16.64■□□□□ 0.25
CITED4Q96RK1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CITED4Q96RK1 RASA4CP-201ENST00000424092 1398 ntBASIC16.64■□□□□ 0.25
CITED4Q96RK1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CITED4Q96RK1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
CITED4Q96RK1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.63■□□□□ 0.25
CITED4Q96RK1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.63■□□□□ 0.25
CITED4Q96RK1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CITED4Q96RK1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CITED4Q96RK1 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.63■□□□□ 0.25
CITED4Q96RK1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CITED4Q96RK1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CITED4Q96RK1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CITED4Q96RK1 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.63■□□□□ 0.25
CITED4Q96RK1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.63■□□□□ 0.25
CITED4Q96RK1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CITED4Q96RK1 AC241377.3-202ENST00000626088 1088 ntBASIC16.63■□□□□ 0.25
CITED4Q96RK1 AC241585.3-202ENST00000628937 1088 ntBASIC16.63■□□□□ 0.25
CITED4Q96RK1 AC245100.8-202ENST00000629247 1058 ntBASIC16.63■□□□□ 0.25
CITED4Q96RK1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CITED4Q96RK1 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CITED4Q96RK1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CITED4Q96RK1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CITED4Q96RK1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CITED4Q96RK1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CITED4Q96RK1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CITED4Q96RK1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CITED4Q96RK1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CITED4Q96RK1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.62■□□□□ 0.25
CITED4Q96RK1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CITED4Q96RK1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CITED4Q96RK1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CITED4Q96RK1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CITED4Q96RK1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CITED4Q96RK1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.62■□□□□ 0.25
CITED4Q96RK1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CITED4Q96RK1 AC087623.3-201ENST00000607047 1098 ntBASIC16.62■□□□□ 0.25
CITED4Q96RK1 AC009086.3-201ENST00000623486 1008 ntBASIC16.62■□□□□ 0.25
CITED4Q96RK1 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CITED4Q96RK1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CITED4Q96RK1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CITED4Q96RK1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CITED4Q96RK1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CITED4Q96RK1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CITED4Q96RK1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CITED4Q96RK1 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.62■□□□□ 0.25
CITED4Q96RK1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
CITED4Q96RK1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
CITED4Q96RK1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CITED4Q96RK1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CITED4Q96RK1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CITED4Q96RK1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CITED4Q96RK1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.62■□□□□ 0.25
CITED4Q96RK1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CITED4Q96RK1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CITED4Q96RK1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CITED4Q96RK1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CITED4Q96RK1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.61■□□□□ 0.25
CITED4Q96RK1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.61■□□□□ 0.25
CITED4Q96RK1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
CITED4Q96RK1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CITED4Q96RK1 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CITED4Q96RK1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CITED4Q96RK1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CITED4Q96RK1 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CITED4Q96RK1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CITED4Q96RK1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.61■□□□□ 0.25
CITED4Q96RK1 MIR4767-201ENST00000582827 78 ntBASIC16.61■□□□□ 0.25
CITED4Q96RK1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.61■□□□□ 0.25
CITED4Q96RK1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.61■□□□□ 0.25
CITED4Q96RK1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.61■□□□□ 0.25
CITED4Q96RK1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CITED4Q96RK1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CITED4Q96RK1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CITED4Q96RK1 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CITED4Q96RK1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CITED4Q96RK1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CITED4Q96RK1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.61■□□□□ 0.25
CITED4Q96RK1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CITED4Q96RK1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.61■□□□□ 0.25
CITED4Q96RK1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CITED4Q96RK1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.6■□□□□ 0.25
CITED4Q96RK1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CITED4Q96RK1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.6■□□□□ 0.25
CITED4Q96RK1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CITED4Q96RK1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CITED4Q96RK1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CITED4Q96RK1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CITED4Q96RK1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.6■□□□□ 0.25
CITED4Q96RK1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CITED4Q96RK1 AC027682.1-201ENST00000562846 899 ntBASIC16.6■□□□□ 0.25
CITED4Q96RK1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.6■□□□□ 0.25
CITED4Q96RK1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CITED4Q96RK1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CITED4Q96RK1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CITED4Q96RK1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms