Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL21A1Q96P44 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL21A1Q96P44 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL21A1Q96P44 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL21A1Q96P44 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.37■□□□□ 0.53
COL21A1Q96P44 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.37■□□□□ 0.53
COL21A1Q96P44 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL21A1Q96P44 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.37■□□□□ 0.53
COL21A1Q96P44 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL21A1Q96P44 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.37■□□□□ 0.53
COL21A1Q96P44 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.37■□□□□ 0.53
COL21A1Q96P44 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
COL21A1Q96P44 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL21A1Q96P44 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL21A1Q96P44 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL21A1Q96P44 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
COL21A1Q96P44 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL21A1Q96P44 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.36■□□□□ 0.53
COL21A1Q96P44 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL21A1Q96P44 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
COL21A1Q96P44 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL21A1Q96P44 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
COL21A1Q96P44 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL21A1Q96P44 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL21A1Q96P44 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL21A1Q96P44 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL21A1Q96P44 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.36■□□□□ 0.53
COL21A1Q96P44 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
COL21A1Q96P44 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.36■□□□□ 0.53
COL21A1Q96P44 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.36■□□□□ 0.53
COL21A1Q96P44 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL21A1Q96P44 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL21A1Q96P44 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL21A1Q96P44 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.36■□□□□ 0.53
COL21A1Q96P44 PHGDH-210ENST00000641115 1638 ntBASIC18.36■□□□□ 0.53
COL21A1Q96P44 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
COL21A1Q96P44 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
COL21A1Q96P44 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL21A1Q96P44 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL21A1Q96P44 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL21A1Q96P44 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL21A1Q96P44 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL21A1Q96P44 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
COL21A1Q96P44 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
COL21A1Q96P44 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.35■□□□□ 0.53
COL21A1Q96P44 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.35■□□□□ 0.53
COL21A1Q96P44 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL21A1Q96P44 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
COL21A1Q96P44 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL21A1Q96P44 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL21A1Q96P44 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.35■□□□□ 0.53
COL21A1Q96P44 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL21A1Q96P44 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL21A1Q96P44 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL21A1Q96P44 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL21A1Q96P44 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL21A1Q96P44 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL21A1Q96P44 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
COL21A1Q96P44 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
COL21A1Q96P44 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL21A1Q96P44 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL21A1Q96P44 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL21A1Q96P44 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
COL21A1Q96P44 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.35■□□□□ 0.53
COL21A1Q96P44 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
COL21A1Q96P44 AP003097.1-201ENST00000530657 1135 ntBASIC18.35■□□□□ 0.53
COL21A1Q96P44 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.35■□□□□ 0.53
COL21A1Q96P44 AC008687.6-201ENST00000596318 630 ntBASIC18.35■□□□□ 0.53
COL21A1Q96P44 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.35■□□□□ 0.53
COL21A1Q96P44 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL21A1Q96P44 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL21A1Q96P44 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.35■□□□□ 0.53
COL21A1Q96P44 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL21A1Q96P44 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL21A1Q96P44 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COL21A1Q96P44 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
COL21A1Q96P44 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL21A1Q96P44 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL21A1Q96P44 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL21A1Q96P44 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL21A1Q96P44 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
COL21A1Q96P44 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL21A1Q96P44 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL21A1Q96P44 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL21A1Q96P44 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL21A1Q96P44 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COL21A1Q96P44 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.34■□□□□ 0.53
COL21A1Q96P44 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
COL21A1Q96P44 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL21A1Q96P44 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL21A1Q96P44 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.34■□□□□ 0.53
COL21A1Q96P44 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.34■□□□□ 0.53
COL21A1Q96P44 AC026366.1-201ENST00000488803 879 ntBASIC18.34■□□□□ 0.53
COL21A1Q96P44 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.34■□□□□ 0.53
COL21A1Q96P44 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COL21A1Q96P44 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.34■□□□□ 0.53
COL21A1Q96P44 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.34■□□□□ 0.53
COL21A1Q96P44 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL21A1Q96P44 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL21A1Q96P44 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms