Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SUSD3Q96L08 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SUSD3Q96L08 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SUSD3Q96L08 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SUSD3Q96L08 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SUSD3Q96L08 AC005521.1-201ENST00000393351 872 ntBASIC20.65■□□□□ 0.9
SUSD3Q96L08 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.65■□□□□ 0.9
SUSD3Q96L08 TMPOP1-202ENST00000424642 1267 ntBASIC20.65■□□□□ 0.9
SUSD3Q96L08 SLC25A3P1-201ENST00000443844 931 ntBASIC20.65■□□□□ 0.9
SUSD3Q96L08 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SUSD3Q96L08 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SUSD3Q96L08 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SUSD3Q96L08 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
SUSD3Q96L08 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SUSD3Q96L08 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SUSD3Q96L08 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SUSD3Q96L08 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SUSD3Q96L08 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SUSD3Q96L08 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SUSD3Q96L08 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SUSD3Q96L08 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.64■□□□□ 0.89
SUSD3Q96L08 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SUSD3Q96L08 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.64■□□□□ 0.89
SUSD3Q96L08 AC010331.1-201ENST00000611423 582 ntBASIC20.64■□□□□ 0.89
SUSD3Q96L08 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SUSD3Q96L08 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SUSD3Q96L08 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SUSD3Q96L08 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SUSD3Q96L08 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.64■□□□□ 0.89
SUSD3Q96L08 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SUSD3Q96L08 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SUSD3Q96L08 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SUSD3Q96L08 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SUSD3Q96L08 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.63■□□□□ 0.89
SUSD3Q96L08 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.63■□□□□ 0.89
SUSD3Q96L08 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SUSD3Q96L08 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SUSD3Q96L08 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SUSD3Q96L08 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.63■□□□□ 0.89
SUSD3Q96L08 LINC01521-201ENST00000504184 1943 ntBASIC20.63■□□□□ 0.89
SUSD3Q96L08 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SUSD3Q96L08 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SUSD3Q96L08 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SUSD3Q96L08 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SUSD3Q96L08 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SUSD3Q96L08 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.63■□□□□ 0.89
SUSD3Q96L08 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.63■□□□□ 0.89
SUSD3Q96L08 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SUSD3Q96L08 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
SUSD3Q96L08 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.63■□□□□ 0.89
SUSD3Q96L08 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SUSD3Q96L08 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SUSD3Q96L08 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SUSD3Q96L08 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SUSD3Q96L08 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SUSD3Q96L08 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.62■□□□□ 0.89
SUSD3Q96L08 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.62■□□□□ 0.89
SUSD3Q96L08 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SUSD3Q96L08 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SUSD3Q96L08 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.62■□□□□ 0.89
SUSD3Q96L08 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SUSD3Q96L08 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.62■□□□□ 0.89
SUSD3Q96L08 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.62■□□□□ 0.89
SUSD3Q96L08 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.62■□□□□ 0.89
SUSD3Q96L08 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SUSD3Q96L08 TERF1P1-201ENST00000311003 1181 ntBASIC20.62■□□□□ 0.89
SUSD3Q96L08 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
SUSD3Q96L08 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SUSD3Q96L08 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
SUSD3Q96L08 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
SUSD3Q96L08 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SUSD3Q96L08 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.62■□□□□ 0.89
SUSD3Q96L08 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SUSD3Q96L08 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
SUSD3Q96L08 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SUSD3Q96L08 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SUSD3Q96L08 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SUSD3Q96L08 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.62■□□□□ 0.89
SUSD3Q96L08 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SUSD3Q96L08 AC073508.3-201ENST00000619697 1419 ntBASIC20.61■□□□□ 0.89
SUSD3Q96L08 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SUSD3Q96L08 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SUSD3Q96L08 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SUSD3Q96L08 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.61■□□□□ 0.89
SUSD3Q96L08 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SUSD3Q96L08 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.61■□□□□ 0.89
SUSD3Q96L08 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.61■□□□□ 0.89
SUSD3Q96L08 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SUSD3Q96L08 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SUSD3Q96L08 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.61■□□□□ 0.89
SUSD3Q96L08 INGX-201ENST00000359239 846 ntBASIC20.61■□□□□ 0.89
SUSD3Q96L08 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.61■□□□□ 0.89
SUSD3Q96L08 ECEL1P2-202ENST00000465689 757 ntBASIC20.61■□□□□ 0.89
SUSD3Q96L08 AC128688.1-201ENST00000487626 519 ntBASIC20.61■□□□□ 0.89
SUSD3Q96L08 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SUSD3Q96L08 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.61■□□□□ 0.89
SUSD3Q96L08 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SUSD3Q96L08 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.61■□□□□ 0.89
SUSD3Q96L08 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SUSD3Q96L08 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms