Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.71■□□□□ 0.75
SHDQ96IW2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SHDQ96IW2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.71■□□□□ 0.75
SHDQ96IW2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.7■□□□□ 0.74
SHDQ96IW2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.7■□□□□ 0.74
SHDQ96IW2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.7■□□□□ 0.74
SHDQ96IW2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHDQ96IW2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHDQ96IW2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHDQ96IW2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SHDQ96IW2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.7■□□□□ 0.74
SHDQ96IW2 AC083849.1-201ENST00000615227 514 ntBASIC19.7■□□□□ 0.74
SHDQ96IW2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHDQ96IW2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SHDQ96IW2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHDQ96IW2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.7■□□□□ 0.74
SHDQ96IW2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHDQ96IW2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHDQ96IW2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHDQ96IW2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.7■□□□□ 0.74
SHDQ96IW2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHDQ96IW2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHDQ96IW2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHDQ96IW2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHDQ96IW2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHDQ96IW2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHDQ96IW2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SHDQ96IW2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.69■□□□□ 0.74
SHDQ96IW2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SHDQ96IW2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHDQ96IW2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHDQ96IW2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
SHDQ96IW2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SHDQ96IW2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
SHDQ96IW2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.69■□□□□ 0.74
SHDQ96IW2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.69■□□□□ 0.74
SHDQ96IW2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SHDQ96IW2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.69■□□□□ 0.74
SHDQ96IW2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHDQ96IW2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.69■□□□□ 0.74
SHDQ96IW2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.69■□□□□ 0.74
SHDQ96IW2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHDQ96IW2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SHDQ96IW2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHDQ96IW2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHDQ96IW2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SHDQ96IW2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHDQ96IW2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHDQ96IW2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHDQ96IW2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHDQ96IW2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SHDQ96IW2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
SHDQ96IW2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SHDQ96IW2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHDQ96IW2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
SHDQ96IW2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.68■□□□□ 0.74
SHDQ96IW2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.68■□□□□ 0.74
SHDQ96IW2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHDQ96IW2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHDQ96IW2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHDQ96IW2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHDQ96IW2 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.68■□□□□ 0.74
SHDQ96IW2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHDQ96IW2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.68■□□□□ 0.74
SHDQ96IW2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SHDQ96IW2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHDQ96IW2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SHDQ96IW2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHDQ96IW2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SHDQ96IW2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHDQ96IW2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.67■□□□□ 0.74
SHDQ96IW2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SHDQ96IW2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SHDQ96IW2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SHDQ96IW2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SHDQ96IW2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.67■□□□□ 0.74
SHDQ96IW2 MIR3652-201ENST00000579335 131 ntBASIC19.67■□□□□ 0.74
SHDQ96IW2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SHDQ96IW2 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.67■□□□□ 0.74
SHDQ96IW2 HYMAI.1-201ENST00000620949 238 ntBASIC19.67■□□□□ 0.74
SHDQ96IW2 AC012313.10-201ENST00000623509 926 ntBASIC19.67■□□□□ 0.74
SHDQ96IW2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHDQ96IW2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHDQ96IW2 AC006128.1-201ENST00000624704 1661 ntBASIC19.67■□□□□ 0.74
SHDQ96IW2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHDQ96IW2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.67■□□□□ 0.74
SHDQ96IW2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHDQ96IW2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.67■□□□□ 0.74
SHDQ96IW2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SHDQ96IW2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHDQ96IW2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
SHDQ96IW2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHDQ96IW2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHDQ96IW2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHDQ96IW2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHDQ96IW2 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SHDQ96IW2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.66■□□□□ 0.74
SHDQ96IW2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.66■□□□□ 0.74
SHDQ96IW2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.66■□□□□ 0.74
SHDQ96IW2 GCSHP2-201ENST00000560971 527 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms