Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTP4A1Q93096 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.47■□□□□ 0.39
PTP4A1Q93096 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTP4A1Q93096 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.47■□□□□ 0.39
PTP4A1Q93096 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTP4A1Q93096 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTP4A1Q93096 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTP4A1Q93096 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTP4A1Q93096 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTP4A1Q93096 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTP4A1Q93096 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTP4A1Q93096 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.47■□□□□ 0.39
PTP4A1Q93096 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.47■□□□□ 0.39
PTP4A1Q93096 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTP4A1Q93096 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.46■□□□□ 0.39
PTP4A1Q93096 AL049812.1-201ENST00000432563 2267 ntBASIC17.46■□□□□ 0.39
PTP4A1Q93096 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTP4A1Q93096 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTP4A1Q93096 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.46■□□□□ 0.39
PTP4A1Q93096 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTP4A1Q93096 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.46■□□□□ 0.39
PTP4A1Q93096 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTP4A1Q93096 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTP4A1Q93096 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.46■□□□□ 0.39
PTP4A1Q93096 SLC29A4P1-201ENST00000398760 971 ntBASIC17.46■□□□□ 0.39
PTP4A1Q93096 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTP4A1Q93096 LSM12P1-201ENST00000411836 588 ntBASIC17.46■□□□□ 0.39
PTP4A1Q93096 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.46■□□□□ 0.39
PTP4A1Q93096 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.46■□□□□ 0.39
PTP4A1Q93096 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.46■□□□□ 0.39
PTP4A1Q93096 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.46■□□□□ 0.39
PTP4A1Q93096 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.46■□□□□ 0.39
PTP4A1Q93096 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTP4A1Q93096 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PTP4A1Q93096 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTP4A1Q93096 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTP4A1Q93096 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
PTP4A1Q93096 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTP4A1Q93096 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PTP4A1Q93096 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.45■□□□□ 0.38
PTP4A1Q93096 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTP4A1Q93096 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTP4A1Q93096 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTP4A1Q93096 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PTP4A1Q93096 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PTP4A1Q93096 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTP4A1Q93096 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTP4A1Q93096 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.45■□□□□ 0.38
PTP4A1Q93096 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.45■□□□□ 0.38
PTP4A1Q93096 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.45■□□□□ 0.38
PTP4A1Q93096 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.45■□□□□ 0.38
PTP4A1Q93096 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.45■□□□□ 0.38
PTP4A1Q93096 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.45■□□□□ 0.38
PTP4A1Q93096 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.45■□□□□ 0.38
PTP4A1Q93096 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.45■□□□□ 0.38
PTP4A1Q93096 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTP4A1Q93096 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTP4A1Q93096 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTP4A1Q93096 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PTP4A1Q93096 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PTP4A1Q93096 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PTP4A1Q93096 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTP4A1Q93096 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.45■□□□□ 0.38
PTP4A1Q93096 AC141586.3-201ENST00000562166 1838 ntBASIC17.44■□□□□ 0.38
PTP4A1Q93096 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTP4A1Q93096 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTP4A1Q93096 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTP4A1Q93096 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTP4A1Q93096 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PTP4A1Q93096 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PTP4A1Q93096 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTP4A1Q93096 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTP4A1Q93096 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
PTP4A1Q93096 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PTP4A1Q93096 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.44■□□□□ 0.38
PTP4A1Q93096 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTP4A1Q93096 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.44■□□□□ 0.38
PTP4A1Q93096 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.44■□□□□ 0.38
PTP4A1Q93096 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.44■□□□□ 0.38
PTP4A1Q93096 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTP4A1Q93096 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTP4A1Q93096 TEX21P-204ENST00000641479 1693 ntBASIC17.44■□□□□ 0.38
PTP4A1Q93096 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTP4A1Q93096 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.44■□□□□ 0.38
PTP4A1Q93096 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.44■□□□□ 0.38
PTP4A1Q93096 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.44■□□□□ 0.38
PTP4A1Q93096 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTP4A1Q93096 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.44■□□□□ 0.38
PTP4A1Q93096 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
PTP4A1Q93096 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTP4A1Q93096 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PTP4A1Q93096 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
PTP4A1Q93096 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTP4A1Q93096 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.43■□□□□ 0.38
PTP4A1Q93096 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTP4A1Q93096 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
PTP4A1Q93096 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTP4A1Q93096 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTP4A1Q93096 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.43■□□□□ 0.38
PTP4A1Q93096 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms