Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 AL121832.2-201ENST00000610979 668 ntBASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 KRT17P1-201ENST00000399211 1546 ntBASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 KRT16P6-202ENST00000425692 1426 ntBASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RTN4IP1Q8WWV3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 LSM12P1-201ENST00000411836 588 ntBASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 AC083906.2-201ENST00000511578 360 ntBASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN4IP1Q8WWV3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 AP001271.2-201ENST00000624018 1556 ntBASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 BX276092.2-201ENST00000417668 665 ntBASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 NCF1B-203ENST00000435988 1254 ntBASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 KRT8P17-201ENST00000453110 1448 ntBASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms