Protein–RNA interactions for Protein: Q8WUY9

DEPDC1B, DEP domain-containing protein 1B, humanhuman

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1BQ8WUY9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
DEPDC1BQ8WUY9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DEPDC1BQ8WUY9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
DEPDC1BQ8WUY9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DEPDC1BQ8WUY9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DEPDC1BQ8WUY9 PTBP1P-201ENST00000554374 1601 ntBASIC20.61■□□□□ 0.89
DEPDC1BQ8WUY9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
DEPDC1BQ8WUY9 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.61■□□□□ 0.89
DEPDC1BQ8WUY9 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
DEPDC1BQ8WUY9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.61■□□□□ 0.89
DEPDC1BQ8WUY9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
DEPDC1BQ8WUY9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DEPDC1BQ8WUY9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DEPDC1BQ8WUY9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DEPDC1BQ8WUY9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
DEPDC1BQ8WUY9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DEPDC1BQ8WUY9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
DEPDC1BQ8WUY9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
DEPDC1BQ8WUY9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DEPDC1BQ8WUY9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
DEPDC1BQ8WUY9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 KSR1P1-201ENST00000446298 240 ntBASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 RN7SL850P-201ENST00000579959 291 ntBASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 MIR6786-201ENST00000616843 113 ntBASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.6■□□□□ 0.89
DEPDC1BQ8WUY9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 AC079598.2-202ENST00000546624 1451 ntBASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 NIFKP9-201ENST00000419265 221 ntBASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 AC005363.2-201ENST00000618631 242 ntBASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 AC092865.7-201ENST00000641832 219 ntBASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1BQ8WUY9 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DEPDC1BQ8WUY9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
DEPDC1BQ8WUY9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.58■□□□□ 0.89
DEPDC1BQ8WUY9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DEPDC1BQ8WUY9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DEPDC1BQ8WUY9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
DEPDC1BQ8WUY9 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.58■□□□□ 0.89
DEPDC1BQ8WUY9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.58■□□□□ 0.89
DEPDC1BQ8WUY9 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DEPDC1BQ8WUY9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.58■□□□□ 0.89
DEPDC1BQ8WUY9 AP000525.1-201ENST00000608286 694 ntBASIC20.58■□□□□ 0.89
DEPDC1BQ8WUY9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
DEPDC1BQ8WUY9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
DEPDC1BQ8WUY9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
DEPDC1BQ8WUY9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
DEPDC1BQ8WUY9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
DEPDC1BQ8WUY9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
DEPDC1BQ8WUY9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.57■□□□□ 0.88
DEPDC1BQ8WUY9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
DEPDC1BQ8WUY9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
DEPDC1BQ8WUY9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
DEPDC1BQ8WUY9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DEPDC1BQ8WUY9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
DEPDC1BQ8WUY9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
DEPDC1BQ8WUY9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
DEPDC1BQ8WUY9 AC116562.2-201ENST00000507042 360 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms