Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 AC020907.5-201ENST00000624372 1936 ntBASIC15.16■□□□□ 0.02
LINC01006Q8NI28 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 CKBP1-201ENST00000565489 1086 ntBASIC15.16■□□□□ 0.02
LINC01006Q8NI28 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01006Q8NI28 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LINC01006Q8NI28 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01006Q8NI28 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01006Q8NI28 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC01006Q8NI28 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01006Q8NI28 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01006Q8NI28 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01006Q8NI28 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01006Q8NI28 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01006Q8NI28 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC01006Q8NI28 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01006Q8NI28 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.15■□□□□ 0.02
LINC01006Q8NI28 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.15■□□□□ 0.02
LINC01006Q8NI28 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.15■□□□□ 0.02
LINC01006Q8NI28 AC140113.3-201ENST00000605663 199 ntBASIC15.15■□□□□ 0.02
LINC01006Q8NI28 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.15■□□□□ 0.02
LINC01006Q8NI28 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LINC01006Q8NI28 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01006Q8NI28 KRT8P41-201ENST00000533985 1514 ntBASIC15.15■□□□□ 0.02
LINC01006Q8NI28 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC01006Q8NI28 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.15■□□□□ 0.02
LINC01006Q8NI28 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01006Q8NI28 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01006Q8NI28 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.15■□□□□ 0.02
LINC01006Q8NI28 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01006Q8NI28 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 HOMER2P1-201ENST00000455653 964 ntBASIC15.14■□□□□ 0.01
LINC01006Q8NI28 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 AP000550.4-202ENST00000639755 178 ntBASIC15.14■□□□□ 0.01
LINC01006Q8NI28 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms