Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDH20Q8N6Y1 SNORA78-201ENST00000459373 127 ntBASIC19.89■□□□□ 0.77
PCDH20Q8N6Y1 AP002982.1-201ENST00000492365 877 ntBASIC19.89■□□□□ 0.77
PCDH20Q8N6Y1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH20Q8N6Y1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDH20Q8N6Y1 AC073195.1-201ENST00000607241 877 ntBASIC19.89■□□□□ 0.77
PCDH20Q8N6Y1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH20Q8N6Y1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PCDH20Q8N6Y1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH20Q8N6Y1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PCDH20Q8N6Y1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDH20Q8N6Y1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH20Q8N6Y1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PCDH20Q8N6Y1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
PCDH20Q8N6Y1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH20Q8N6Y1 TMEM179-206ENST00000616017 1645 ntBASIC19.88■□□□□ 0.77
PCDH20Q8N6Y1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDH20Q8N6Y1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
PCDH20Q8N6Y1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDH20Q8N6Y1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH20Q8N6Y1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDH20Q8N6Y1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PCDH20Q8N6Y1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
PCDH20Q8N6Y1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDH20Q8N6Y1 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.88■□□□□ 0.77
PCDH20Q8N6Y1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.88■□□□□ 0.77
PCDH20Q8N6Y1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH20Q8N6Y1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDH20Q8N6Y1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH20Q8N6Y1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH20Q8N6Y1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH20Q8N6Y1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH20Q8N6Y1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDH20Q8N6Y1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH20Q8N6Y1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDH20Q8N6Y1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH20Q8N6Y1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.87■□□□□ 0.77
PCDH20Q8N6Y1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH20Q8N6Y1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH20Q8N6Y1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDH20Q8N6Y1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDH20Q8N6Y1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDH20Q8N6Y1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDH20Q8N6Y1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH20Q8N6Y1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH20Q8N6Y1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.87■□□□□ 0.77
PCDH20Q8N6Y1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PCDH20Q8N6Y1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDH20Q8N6Y1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDH20Q8N6Y1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDH20Q8N6Y1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDH20Q8N6Y1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH20Q8N6Y1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDH20Q8N6Y1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.86■□□□□ 0.77
PCDH20Q8N6Y1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH20Q8N6Y1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH20Q8N6Y1 NIFKP9-201ENST00000419265 221 ntBASIC19.86■□□□□ 0.77
PCDH20Q8N6Y1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH20Q8N6Y1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH20Q8N6Y1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDH20Q8N6Y1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.86■□□□□ 0.77
PCDH20Q8N6Y1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.86■□□□□ 0.77
PCDH20Q8N6Y1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH20Q8N6Y1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
PCDH20Q8N6Y1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH20Q8N6Y1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH20Q8N6Y1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH20Q8N6Y1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH20Q8N6Y1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
PCDH20Q8N6Y1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH20Q8N6Y1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH20Q8N6Y1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH20Q8N6Y1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH20Q8N6Y1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDH20Q8N6Y1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH20Q8N6Y1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH20Q8N6Y1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH20Q8N6Y1 KSR1P1-201ENST00000446298 240 ntBASIC19.85■□□□□ 0.77
PCDH20Q8N6Y1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.85■□□□□ 0.77
PCDH20Q8N6Y1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDH20Q8N6Y1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.85■□□□□ 0.77
PCDH20Q8N6Y1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH20Q8N6Y1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH20Q8N6Y1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH20Q8N6Y1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.85■□□□□ 0.77
PCDH20Q8N6Y1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDH20Q8N6Y1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDH20Q8N6Y1 TCF3P1-201ENST00000423021 1937 ntBASIC19.84■□□□□ 0.77
PCDH20Q8N6Y1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
PCDH20Q8N6Y1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDH20Q8N6Y1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH20Q8N6Y1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH20Q8N6Y1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH20Q8N6Y1 KRT17P2-201ENST00000300992 1314 ntBASIC19.84■□□□□ 0.77
PCDH20Q8N6Y1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PCDH20Q8N6Y1 AC087289.5-201ENST00000586076 3175 ntBASIC19.84■□□□□ 0.77
PCDH20Q8N6Y1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH20Q8N6Y1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH20Q8N6Y1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDH20Q8N6Y1 TSPY7P-201ENST00000431358 1114 ntBASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms