Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 C1QBPP2-201ENST00000528754 825 ntBASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 AC124016.1-201ENST00000609552 612 ntBASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATPAF2Q8N5M1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.95■□□□□ 0.79
ATPAF2Q8N5M1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
ATPAF2Q8N5M1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATPAF2Q8N5M1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATPAF2Q8N5M1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
ATPAF2Q8N5M1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
ATPAF2Q8N5M1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATPAF2Q8N5M1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATPAF2Q8N5M1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.94■□□□□ 0.78
ATPAF2Q8N5M1 AC133681.1-201ENST00000465482 601 ntBASIC19.94■□□□□ 0.78
ATPAF2Q8N5M1 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.94■□□□□ 0.78
ATPAF2Q8N5M1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ATPAF2Q8N5M1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.94■□□□□ 0.78
ATPAF2Q8N5M1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.94■□□□□ 0.78
ATPAF2Q8N5M1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATPAF2Q8N5M1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
ATPAF2Q8N5M1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATPAF2Q8N5M1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATPAF2Q8N5M1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.94■□□□□ 0.78
ATPAF2Q8N5M1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATPAF2Q8N5M1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATPAF2Q8N5M1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATPAF2Q8N5M1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.93■□□□□ 0.78
ATPAF2Q8N5M1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATPAF2Q8N5M1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ATPAF2Q8N5M1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.93■□□□□ 0.78
ATPAF2Q8N5M1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.93■□□□□ 0.78
ATPAF2Q8N5M1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATPAF2Q8N5M1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
ATPAF2Q8N5M1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.93■□□□□ 0.78
ATPAF2Q8N5M1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.93■□□□□ 0.78
ATPAF2Q8N5M1 AC110285.5-201ENST00000611501 352 ntBASIC19.93■□□□□ 0.78
ATPAF2Q8N5M1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATPAF2Q8N5M1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.93■□□□□ 0.78
ATPAF2Q8N5M1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATPAF2Q8N5M1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.93■□□□□ 0.78
ATPAF2Q8N5M1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.93■□□□□ 0.78
ATPAF2Q8N5M1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATPAF2Q8N5M1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.93■□□□□ 0.78
ATPAF2Q8N5M1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.93■□□□□ 0.78
ATPAF2Q8N5M1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATPAF2Q8N5M1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.92■□□□□ 0.78
ATPAF2Q8N5M1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.92■□□□□ 0.78
ATPAF2Q8N5M1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.92■□□□□ 0.78
ATPAF2Q8N5M1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATPAF2Q8N5M1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms