Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.25■□□□□ 0.67
CPNE9Q8IYJ1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE9Q8IYJ1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CPNE9Q8IYJ1 AP006587.1-201ENST00000534129 1502 ntBASIC19.25■□□□□ 0.67
CPNE9Q8IYJ1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.25■□□□□ 0.67
CPNE9Q8IYJ1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE9Q8IYJ1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CPNE9Q8IYJ1 AC026471.1-201ENST00000564629 3026 ntBASIC19.25■□□□□ 0.67
CPNE9Q8IYJ1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 AC008403.3-201ENST00000598924 454 ntBASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 AC098818.2-201ENST00000564925 2320 ntBASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE9Q8IYJ1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 POM121L13P-201ENST00000422362 380 ntBASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 AL121829.2-201ENST00000620908 328 ntBASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE9Q8IYJ1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 KRT18P6-201ENST00000555540 1265 ntBASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE9Q8IYJ1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms