Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.64■■□□□ 1.05
DHX40Q8IX18 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
DHX40Q8IX18 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DHX40Q8IX18 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
DHX40Q8IX18 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.64■■□□□ 1.05
DHX40Q8IX18 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DHX40Q8IX18 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.63■■□□□ 1.05
DHX40Q8IX18 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
DHX40Q8IX18 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DHX40Q8IX18 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DHX40Q8IX18 FP475955.4-201ENST00000623131 1990 ntBASIC21.63■■□□□ 1.05
DHX40Q8IX18 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DHX40Q8IX18 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DHX40Q8IX18 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DHX40Q8IX18 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.63■■□□□ 1.05
DHX40Q8IX18 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DHX40Q8IX18 ID1-201ENST00000376105 1233 ntBASIC21.63■■□□□ 1.05
DHX40Q8IX18 AC026185.1-201ENST00000445748 174 ntBASIC21.63■■□□□ 1.05
DHX40Q8IX18 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.63■■□□□ 1.05
DHX40Q8IX18 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DHX40Q8IX18 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DHX40Q8IX18 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DHX40Q8IX18 AL031598.1-201ENST00000561511 1773 ntBASIC21.63■■□□□ 1.05
DHX40Q8IX18 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DHX40Q8IX18 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DHX40Q8IX18 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.63■■□□□ 1.05
DHX40Q8IX18 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DHX40Q8IX18 ZNF815P-204ENST00000434898 1737 ntBASIC21.63■■□□□ 1.05
DHX40Q8IX18 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DHX40Q8IX18 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DHX40Q8IX18 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DHX40Q8IX18 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DHX40Q8IX18 AC010980.2-201ENST00000587099 1412 ntBASIC21.63■■□□□ 1.05
DHX40Q8IX18 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DHX40Q8IX18 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
DHX40Q8IX18 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.62■■□□□ 1.05
DHX40Q8IX18 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
DHX40Q8IX18 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DHX40Q8IX18 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DHX40Q8IX18 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DHX40Q8IX18 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
DHX40Q8IX18 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.62■■□□□ 1.05
DHX40Q8IX18 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
DHX40Q8IX18 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.62■■□□□ 1.05
DHX40Q8IX18 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.62■■□□□ 1.05
DHX40Q8IX18 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.62■■□□□ 1.05
DHX40Q8IX18 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.62■■□□□ 1.05
DHX40Q8IX18 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DHX40Q8IX18 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.62■■□□□ 1.05
DHX40Q8IX18 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.62■■□□□ 1.05
DHX40Q8IX18 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.62■■□□□ 1.05
DHX40Q8IX18 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.62■■□□□ 1.05
DHX40Q8IX18 AL589743.5-201ENST00000616611 1050 ntBASIC21.62■■□□□ 1.05
DHX40Q8IX18 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DHX40Q8IX18 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.62■■□□□ 1.05
DHX40Q8IX18 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DHX40Q8IX18 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DHX40Q8IX18 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DHX40Q8IX18 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DHX40Q8IX18 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DHX40Q8IX18 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DHX40Q8IX18 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DHX40Q8IX18 TFP1-202ENST00000475455 1573 ntBASIC21.61■■□□□ 1.05
DHX40Q8IX18 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DHX40Q8IX18 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.61■■□□□ 1.05
DHX40Q8IX18 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DHX40Q8IX18 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.61■■□□□ 1.05
DHX40Q8IX18 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DHX40Q8IX18 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DHX40Q8IX18 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.61■■□□□ 1.05
DHX40Q8IX18 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DHX40Q8IX18 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
DHX40Q8IX18 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
DHX40Q8IX18 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DHX40Q8IX18 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
DHX40Q8IX18 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.61■■□□□ 1.05
DHX40Q8IX18 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.61■■□□□ 1.05
DHX40Q8IX18 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.61■■□□□ 1.05
DHX40Q8IX18 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.61■■□□□ 1.05
DHX40Q8IX18 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DHX40Q8IX18 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.61■■□□□ 1.05
DHX40Q8IX18 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.61■■□□□ 1.05
DHX40Q8IX18 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.61■■□□□ 1.05
DHX40Q8IX18 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
DHX40Q8IX18 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DHX40Q8IX18 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DHX40Q8IX18 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DHX40Q8IX18 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DHX40Q8IX18 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
DHX40Q8IX18 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.61■■□□□ 1.05
DHX40Q8IX18 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DHX40Q8IX18 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
DHX40Q8IX18 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
DHX40Q8IX18 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DHX40Q8IX18 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DHX40Q8IX18 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DHX40Q8IX18 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DHX40Q8IX18 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
DHX40Q8IX18 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.6■■□□□ 1.05
DHX40Q8IX18 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms