Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 AC104417.2-201ENST00000562989 1793 ntBASIC24.06■■□□□ 1.44
CHD1LQ86WJ1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHD1LQ86WJ1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1LQ86WJ1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1LQ86WJ1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
CHD1LQ86WJ1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1LQ86WJ1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1LQ86WJ1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1LQ86WJ1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1LQ86WJ1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC24.05■■□□□ 1.44
CHD1LQ86WJ1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1LQ86WJ1 NME1-207ENST00000480143 964 ntTSL 2 BASIC24.05■■□□□ 1.44
CHD1LQ86WJ1 KRT18P16-201ENST00000510337 1294 ntBASIC24.05■■□□□ 1.44
CHD1LQ86WJ1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC24.05■■□□□ 1.44
CHD1LQ86WJ1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC24.05■■□□□ 1.44
CHD1LQ86WJ1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1LQ86WJ1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1LQ86WJ1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1LQ86WJ1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC24.05■■□□□ 1.44
CHD1LQ86WJ1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHD1LQ86WJ1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CHD1LQ86WJ1 AC004408.2-201ENST00000623613 2777 ntBASIC24.04■■□□□ 1.44
CHD1LQ86WJ1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
CHD1LQ86WJ1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC24.04■■□□□ 1.44
CHD1LQ86WJ1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC24.04■■□□□ 1.44
CHD1LQ86WJ1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHD1LQ86WJ1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHD1LQ86WJ1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHD1LQ86WJ1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHD1LQ86WJ1 ANKRD18DP-204ENST00000455355 1975 ntBASIC24.04■■□□□ 1.44
CHD1LQ86WJ1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHD1LQ86WJ1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
CHD1LQ86WJ1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.04■■□□□ 1.44
CHD1LQ86WJ1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.04■■□□□ 1.44
CHD1LQ86WJ1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CHD1LQ86WJ1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
CHD1LQ86WJ1 AC141586.3-201ENST00000562166 1838 ntBASIC24.04■■□□□ 1.44
CHD1LQ86WJ1 SDHAP1-207ENST00000440850 2000 ntBASIC24.04■■□□□ 1.44
CHD1LQ86WJ1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHD1LQ86WJ1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHD1LQ86WJ1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CHD1LQ86WJ1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC24.04■■□□□ 1.44
CHD1LQ86WJ1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC24.04■■□□□ 1.44
CHD1LQ86WJ1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 UNC93B5-201ENST00000530315 699 ntBASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC24.03■■□□□ 1.44
CHD1LQ86WJ1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
CHD1LQ86WJ1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHD1LQ86WJ1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
CHD1LQ86WJ1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHD1LQ86WJ1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC24.02■■□□□ 1.44
CHD1LQ86WJ1 AL161938.1-201ENST00000569833 2180 ntBASIC24.02■■□□□ 1.44
CHD1LQ86WJ1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC24.02■■□□□ 1.44
CHD1LQ86WJ1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHD1LQ86WJ1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHD1LQ86WJ1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHD1LQ86WJ1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC24.02■■□□□ 1.44
CHD1LQ86WJ1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHD1LQ86WJ1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC24.02■■□□□ 1.44
CHD1LQ86WJ1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
CHD1LQ86WJ1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHD1LQ86WJ1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHD1LQ86WJ1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC24.02■■□□□ 1.44
CHD1LQ86WJ1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CHD1LQ86WJ1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHD1LQ86WJ1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHD1LQ86WJ1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
CHD1LQ86WJ1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHD1LQ86WJ1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHD1LQ86WJ1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC24.01■■□□□ 1.43
CHD1LQ86WJ1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHD1LQ86WJ1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CHD1LQ86WJ1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHD1LQ86WJ1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CHD1LQ86WJ1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC24.01■■□□□ 1.43
CHD1LQ86WJ1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms