Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LDB1Q86U70 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.42■□□□□ 0.7
LDB1Q86U70 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.42■□□□□ 0.7
LDB1Q86U70 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.42■□□□□ 0.7
LDB1Q86U70 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDB1Q86U70 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
LDB1Q86U70 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LDB1Q86U70 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDB1Q86U70 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDB1Q86U70 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDB1Q86U70 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDB1Q86U70 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDB1Q86U70 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.41■□□□□ 0.7
LDB1Q86U70 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDB1Q86U70 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDB1Q86U70 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDB1Q86U70 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.41■□□□□ 0.7
LDB1Q86U70 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDB1Q86U70 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDB1Q86U70 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LDB1Q86U70 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
LDB1Q86U70 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LDB1Q86U70 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LDB1Q86U70 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDB1Q86U70 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDB1Q86U70 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LDB1Q86U70 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.41■□□□□ 0.7
LDB1Q86U70 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.41■□□□□ 0.7
LDB1Q86U70 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
LDB1Q86U70 AC026366.1-201ENST00000488803 879 ntBASIC19.41■□□□□ 0.7
LDB1Q86U70 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.41■□□□□ 0.7
LDB1Q86U70 MIR4651-201ENST00000582622 73 ntBASIC19.41■□□□□ 0.7
LDB1Q86U70 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.41■□□□□ 0.7
LDB1Q86U70 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDB1Q86U70 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.41■□□□□ 0.7
LDB1Q86U70 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDB1Q86U70 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LDB1Q86U70 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LDB1Q86U70 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDB1Q86U70 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LDB1Q86U70 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDB1Q86U70 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
LDB1Q86U70 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LDB1Q86U70 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDB1Q86U70 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LDB1Q86U70 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDB1Q86U70 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.4■□□□□ 0.7
LDB1Q86U70 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LDB1Q86U70 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.4■□□□□ 0.7
LDB1Q86U70 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LDB1Q86U70 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDB1Q86U70 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDB1Q86U70 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDB1Q86U70 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LDB1Q86U70 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDB1Q86U70 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LDB1Q86U70 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDB1Q86U70 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LDB1Q86U70 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDB1Q86U70 ESRRAP1-201ENST00000400596 1257 ntBASIC19.4■□□□□ 0.7
LDB1Q86U70 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.4■□□□□ 0.7
LDB1Q86U70 YBX1P10-201ENST00000444752 975 ntBASIC19.4■□□□□ 0.7
LDB1Q86U70 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
LDB1Q86U70 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.4■□□□□ 0.7
LDB1Q86U70 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.4■□□□□ 0.7
LDB1Q86U70 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LDB1Q86U70 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDB1Q86U70 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.4■□□□□ 0.7
LDB1Q86U70 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDB1Q86U70 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.4■□□□□ 0.7
LDB1Q86U70 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDB1Q86U70 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LDB1Q86U70 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.4■□□□□ 0.7
LDB1Q86U70 AC120498.9-201ENST00000339021 3867 ntBASIC19.4■□□□□ 0.7
LDB1Q86U70 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDB1Q86U70 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDB1Q86U70 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LDB1Q86U70 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDB1Q86U70 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDB1Q86U70 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDB1Q86U70 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDB1Q86U70 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LDB1Q86U70 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDB1Q86U70 AC069544.1-201ENST00000609399 999 ntBASIC19.39■□□□□ 0.69
LDB1Q86U70 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDB1Q86U70 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDB1Q86U70 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDB1Q86U70 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LDB1Q86U70 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.39■□□□□ 0.69
LDB1Q86U70 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDB1Q86U70 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDB1Q86U70 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDB1Q86U70 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.39■□□□□ 0.69
LDB1Q86U70 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LDB1Q86U70 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.39■□□□□ 0.69
LDB1Q86U70 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDB1Q86U70 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.39■□□□□ 0.69
LDB1Q86U70 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDB1Q86U70 AC098818.2-201ENST00000564925 2320 ntBASIC19.39■□□□□ 0.69
LDB1Q86U70 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms