Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
MRPL55Q7Z7F7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
MRPL55Q7Z7F7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
MRPL55Q7Z7F7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 PWWP2AP1-201ENST00000429776 2273 ntBASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 AC004911.1-201ENST00000416316 871 ntBASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 SERPINH1P1-201ENST00000419794 1249 ntBASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 AL137784.2-201ENST00000607332 1000 ntBASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 AC080038.1-201ENST00000611274 1154 ntBASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 MKRN4P-201ENST00000444706 1521 ntBASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL55Q7Z7F7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 AF201337.1-201ENST00000520239 748 ntBASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC12.51□□□□□ -0.41
MRPL55Q7Z7F7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 AC105036.2-201ENST00000569468 176 ntBASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 AC073111.5-205ENST00000641717 521 ntBASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 AC093484.2-201ENST00000580996 2166 ntBASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms