Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC13.59□□□□□ -0.23
CSMD3Q7Z407 AL136038.3-201ENST00000561909 1096 ntBASIC13.59□□□□□ -0.23
CSMD3Q7Z407 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.59□□□□□ -0.23
CSMD3Q7Z407 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSMD3Q7Z407 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC13.59□□□□□ -0.23
CSMD3Q7Z407 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC13.59□□□□□ -0.23
CSMD3Q7Z407 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CSMD3Q7Z407 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC13.59□□□□□ -0.23
CSMD3Q7Z407 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CSMD3Q7Z407 ECEL1P1-201ENST00000373592 1742 ntBASIC13.59□□□□□ -0.23
CSMD3Q7Z407 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSMD3Q7Z407 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSMD3Q7Z407 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.58□□□□□ -0.23
CSMD3Q7Z407 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CSMD3Q7Z407 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
CSMD3Q7Z407 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
CSMD3Q7Z407 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.58□□□□□ -0.24
CSMD3Q7Z407 AC139530.3-201ENST00000620344 690 ntBASIC13.58□□□□□ -0.24
CSMD3Q7Z407 AL023973.1-201ENST00000624619 620 ntBASIC13.58□□□□□ -0.24
CSMD3Q7Z407 AL031432.5-201ENST00000641059 760 ntBASIC13.58□□□□□ -0.24
CSMD3Q7Z407 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD3Q7Z407 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CSMD3Q7Z407 AC244015.2-201ENST00000616358 1861 ntBASIC13.58□□□□□ -0.24
CSMD3Q7Z407 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD3Q7Z407 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CSMD3Q7Z407 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC13.58□□□□□ -0.24
CSMD3Q7Z407 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD3Q7Z407 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD3Q7Z407 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD3Q7Z407 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CSMD3Q7Z407 AC112907.2-201ENST00000448639 330 ntBASIC13.58□□□□□ -0.24
CSMD3Q7Z407 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.58□□□□□ -0.24
CSMD3Q7Z407 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.58□□□□□ -0.24
CSMD3Q7Z407 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.58□□□□□ -0.24
CSMD3Q7Z407 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
CSMD3Q7Z407 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD3Q7Z407 SMG8-203ENST00000578922 2178 ntBASIC13.58□□□□□ -0.24
CSMD3Q7Z407 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD3Q7Z407 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.57□□□□□ -0.24
CSMD3Q7Z407 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.57□□□□□ -0.24
CSMD3Q7Z407 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.57□□□□□ -0.24
CSMD3Q7Z407 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CSMD3Q7Z407 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CSMD3Q7Z407 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD3Q7Z407 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD3Q7Z407 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC13.57□□□□□ -0.24
CSMD3Q7Z407 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.57□□□□□ -0.24
CSMD3Q7Z407 AL031008.1-201ENST00000619963 541 ntBASIC13.57□□□□□ -0.24
CSMD3Q7Z407 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD3Q7Z407 AC026310.3-201ENST00000625186 2373 ntBASIC13.57□□□□□ -0.24
CSMD3Q7Z407 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CSMD3Q7Z407 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD3Q7Z407 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.57□□□□□ -0.24
CSMD3Q7Z407 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.57□□□□□ -0.24
CSMD3Q7Z407 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC13.57□□□□□ -0.24
CSMD3Q7Z407 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD3Q7Z407 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD3Q7Z407 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD3Q7Z407 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD3Q7Z407 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
CSMD3Q7Z407 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.57□□□□□ -0.24
CSMD3Q7Z407 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13.56□□□□□ -0.24
CSMD3Q7Z407 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.56□□□□□ -0.24
CSMD3Q7Z407 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD3Q7Z407 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CSMD3Q7Z407 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD3Q7Z407 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD3Q7Z407 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD3Q7Z407 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.56□□□□□ -0.24
CSMD3Q7Z407 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC13.56□□□□□ -0.24
CSMD3Q7Z407 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD3Q7Z407 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.56□□□□□ -0.24
CSMD3Q7Z407 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD3Q7Z407 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.56□□□□□ -0.24
CSMD3Q7Z407 FP700111.2-201ENST00000619190 1892 ntBASIC13.56□□□□□ -0.24
CSMD3Q7Z407 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD3Q7Z407 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD3Q7Z407 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CSMD3Q7Z407 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD3Q7Z407 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.56□□□□□ -0.24
CSMD3Q7Z407 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.56□□□□□ -0.24
CSMD3Q7Z407 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.56□□□□□ -0.24
CSMD3Q7Z407 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC13.56□□□□□ -0.24
CSMD3Q7Z407 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD3Q7Z407 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CSMD3Q7Z407 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CSMD3Q7Z407 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.55□□□□□ -0.24
CSMD3Q7Z407 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD3Q7Z407 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD3Q7Z407 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.55□□□□□ -0.24
CSMD3Q7Z407 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.55□□□□□ -0.24
CSMD3Q7Z407 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC13.55□□□□□ -0.24
CSMD3Q7Z407 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD3Q7Z407 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD3Q7Z407 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD3Q7Z407 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CSMD3Q7Z407 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CSMD3Q7Z407 AL645929.1-201ENST00000420084 975 ntBASIC13.55□□□□□ -0.24
CSMD3Q7Z407 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.55□□□□□ -0.24
CSMD3Q7Z407 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms