Protein–RNA interactions for Protein: Q7RTP0

NIPA1, Magnesium transporter NIPA1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPA1Q7RTP0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
NIPA1Q7RTP0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NIPA1Q7RTP0 KRT8P41-201ENST00000533985 1514 ntBASIC21.85■■□□□ 1.09
NIPA1Q7RTP0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NIPA1Q7RTP0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.85■■□□□ 1.09
NIPA1Q7RTP0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
NIPA1Q7RTP0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.85■■□□□ 1.09
NIPA1Q7RTP0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NIPA1Q7RTP0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
NIPA1Q7RTP0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NIPA1Q7RTP0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.85■■□□□ 1.09
NIPA1Q7RTP0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NIPA1Q7RTP0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.85■■□□□ 1.09
NIPA1Q7RTP0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.85■■□□□ 1.09
NIPA1Q7RTP0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NIPA1Q7RTP0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
NIPA1Q7RTP0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
NIPA1Q7RTP0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
NIPA1Q7RTP0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NIPA1Q7RTP0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NIPA1Q7RTP0 LINC01465-201ENST00000408887 1940 ntBASIC21.84■■□□□ 1.09
NIPA1Q7RTP0 AC104417.2-201ENST00000562989 1793 ntBASIC21.84■■□□□ 1.09
NIPA1Q7RTP0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NIPA1Q7RTP0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NIPA1Q7RTP0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
NIPA1Q7RTP0 ZNF815P-204ENST00000434898 1737 ntBASIC21.84■■□□□ 1.09
NIPA1Q7RTP0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
NIPA1Q7RTP0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NIPA1Q7RTP0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.84■■□□□ 1.09
NIPA1Q7RTP0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
NIPA1Q7RTP0 MIR1238-201ENST00000408483 83 ntBASIC21.84■■□□□ 1.09
NIPA1Q7RTP0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.84■■□□□ 1.09
NIPA1Q7RTP0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.84■■□□□ 1.09
NIPA1Q7RTP0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.84■■□□□ 1.09
NIPA1Q7RTP0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NIPA1Q7RTP0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NIPA1Q7RTP0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NIPA1Q7RTP0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.84■■□□□ 1.09
NIPA1Q7RTP0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.84■■□□□ 1.09
NIPA1Q7RTP0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.84■■□□□ 1.09
NIPA1Q7RTP0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NIPA1Q7RTP0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.83■■□□□ 1.09
NIPA1Q7RTP0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NIPA1Q7RTP0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.83■■□□□ 1.09
NIPA1Q7RTP0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.83■■□□□ 1.09
NIPA1Q7RTP0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NIPA1Q7RTP0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.83■■□□□ 1.09
NIPA1Q7RTP0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.83■■□□□ 1.09
NIPA1Q7RTP0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
NIPA1Q7RTP0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.83■■□□□ 1.09
NIPA1Q7RTP0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NIPA1Q7RTP0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NIPA1Q7RTP0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
NIPA1Q7RTP0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
NIPA1Q7RTP0 AC211429.1-201ENST00000415277 523 ntBASIC21.83■■□□□ 1.09
NIPA1Q7RTP0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.83■■□□□ 1.09
NIPA1Q7RTP0 AC012306.2-201ENST00000609350 630 ntBASIC21.83■■□□□ 1.09
NIPA1Q7RTP0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.83■■□□□ 1.09
NIPA1Q7RTP0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.83■■□□□ 1.09
NIPA1Q7RTP0 TREX1-205ENST00000625293 1783 ntBASIC21.83■■□□□ 1.09
NIPA1Q7RTP0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NIPA1Q7RTP0 AC096733.2-201ENST00000609937 1394 ntBASIC21.83■■□□□ 1.08
NIPA1Q7RTP0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NIPA1Q7RTP0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
NIPA1Q7RTP0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 FAM207BP-201ENST00000447172 505 ntBASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 AC097493.4-201ENST00000641197 219 ntBASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.82■■□□□ 1.08
NIPA1Q7RTP0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
NIPA1Q7RTP0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
NIPA1Q7RTP0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NIPA1Q7RTP0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NIPA1Q7RTP0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.81■■□□□ 1.08
NIPA1Q7RTP0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NIPA1Q7RTP0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NIPA1Q7RTP0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NIPA1Q7RTP0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NIPA1Q7RTP0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms