Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF549Q6P9A3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
ZNF549Q6P9A3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF549Q6P9A3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF549Q6P9A3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF549Q6P9A3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.32■□□□□ 0.68
ZNF549Q6P9A3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ZNF549Q6P9A3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF549Q6P9A3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF549Q6P9A3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF549Q6P9A3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF549Q6P9A3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF549Q6P9A3 AC098818.2-201ENST00000564925 2320 ntBASIC19.31■□□□□ 0.68
ZNF549Q6P9A3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.31■□□□□ 0.68
ZNF549Q6P9A3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF549Q6P9A3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF549Q6P9A3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ZNF549Q6P9A3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.31■□□□□ 0.68
ZNF549Q6P9A3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF549Q6P9A3 YBX1P10-201ENST00000444752 975 ntBASIC19.31■□□□□ 0.68
ZNF549Q6P9A3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
ZNF549Q6P9A3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
ZNF549Q6P9A3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.31■□□□□ 0.68
ZNF549Q6P9A3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.31■□□□□ 0.68
ZNF549Q6P9A3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF549Q6P9A3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF549Q6P9A3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ZNF549Q6P9A3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
ZNF549Q6P9A3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF549Q6P9A3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF549Q6P9A3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.31■□□□□ 0.68
ZNF549Q6P9A3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF549Q6P9A3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 AC018445.3-201ENST00000624177 1945 ntBASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF549Q6P9A3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.29■□□□□ 0.68
ZNF549Q6P9A3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.29■□□□□ 0.68
ZNF549Q6P9A3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ZNF549Q6P9A3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF549Q6P9A3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF549Q6P9A3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.29■□□□□ 0.68
ZNF549Q6P9A3 POM121L13P-201ENST00000422362 380 ntBASIC19.29■□□□□ 0.68
ZNF549Q6P9A3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.29■□□□□ 0.68
ZNF549Q6P9A3 RNA5SP413-201ENST00000516373 109 ntBASIC19.29■□□□□ 0.68
ZNF549Q6P9A3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.29■□□□□ 0.68
ZNF549Q6P9A3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF549Q6P9A3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF549Q6P9A3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF549Q6P9A3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.29■□□□□ 0.68
ZNF549Q6P9A3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF549Q6P9A3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 AP000974.1-201ENST00000623909 2387 ntBASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms