Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CASC4Q6P4E1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CASC4Q6P4E1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CASC4Q6P4E1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CASC4Q6P4E1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CASC4Q6P4E1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CASC4Q6P4E1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CASC4Q6P4E1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CASC4Q6P4E1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CASC4Q6P4E1 SLC29A4P1-201ENST00000398760 971 ntBASIC19.83■□□□□ 0.77
CASC4Q6P4E1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.83■□□□□ 0.77
CASC4Q6P4E1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.83■□□□□ 0.77
CASC4Q6P4E1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.83■□□□□ 0.77
CASC4Q6P4E1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.83■□□□□ 0.77
CASC4Q6P4E1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.83■□□□□ 0.77
CASC4Q6P4E1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CASC4Q6P4E1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.83■□□□□ 0.77
CASC4Q6P4E1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CASC4Q6P4E1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CASC4Q6P4E1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.83■□□□□ 0.76
CASC4Q6P4E1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CASC4Q6P4E1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CASC4Q6P4E1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CASC4Q6P4E1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CASC4Q6P4E1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CASC4Q6P4E1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CASC4Q6P4E1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CASC4Q6P4E1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CASC4Q6P4E1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CASC4Q6P4E1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CASC4Q6P4E1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 BCL2-203ENST00000589955 5011 ntBASIC19.82■□□□□ 0.76
CASC4Q6P4E1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.82■□□□□ 0.76
CASC4Q6P4E1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASC4Q6P4E1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CASC4Q6P4E1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASC4Q6P4E1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.81■□□□□ 0.76
CASC4Q6P4E1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASC4Q6P4E1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CASC4Q6P4E1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.81■□□□□ 0.76
CASC4Q6P4E1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASC4Q6P4E1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CASC4Q6P4E1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.81■□□□□ 0.76
CASC4Q6P4E1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASC4Q6P4E1 AC005829.2-201ENST00000571422 1056 ntBASIC19.81■□□□□ 0.76
CASC4Q6P4E1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.81■□□□□ 0.76
CASC4Q6P4E1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
CASC4Q6P4E1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.81■□□□□ 0.76
CASC4Q6P4E1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASC4Q6P4E1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.81■□□□□ 0.76
CASC4Q6P4E1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASC4Q6P4E1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.81■□□□□ 0.76
CASC4Q6P4E1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.81■□□□□ 0.76
CASC4Q6P4E1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.81■□□□□ 0.76
CASC4Q6P4E1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASC4Q6P4E1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASC4Q6P4E1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CASC4Q6P4E1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASC4Q6P4E1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASC4Q6P4E1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASC4Q6P4E1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.8■□□□□ 0.76
CASC4Q6P4E1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASC4Q6P4E1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASC4Q6P4E1 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.8■□□□□ 0.76
CASC4Q6P4E1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASC4Q6P4E1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CASC4Q6P4E1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.8■□□□□ 0.76
CASC4Q6P4E1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CASC4Q6P4E1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms