Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SWSAP1Q6NVH7 FITM1-202ENST00000559294 800 ntBASIC21.72■■□□□ 1.07
SWSAP1Q6NVH7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.72■■□□□ 1.07
SWSAP1Q6NVH7 RCC2P6-201ENST00000526625 1557 ntBASIC21.72■■□□□ 1.07
SWSAP1Q6NVH7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.72■■□□□ 1.07
SWSAP1Q6NVH7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SWSAP1Q6NVH7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.72■■□□□ 1.07
SWSAP1Q6NVH7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SWSAP1Q6NVH7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SWSAP1Q6NVH7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SWSAP1Q6NVH7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SWSAP1Q6NVH7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.71■■□□□ 1.07
SWSAP1Q6NVH7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SWSAP1Q6NVH7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SWSAP1Q6NVH7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.71■■□□□ 1.07
SWSAP1Q6NVH7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SWSAP1Q6NVH7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SWSAP1Q6NVH7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SWSAP1Q6NVH7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SWSAP1Q6NVH7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SWSAP1Q6NVH7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SWSAP1Q6NVH7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SWSAP1Q6NVH7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SWSAP1Q6NVH7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.71■■□□□ 1.07
SWSAP1Q6NVH7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.71■■□□□ 1.07
SWSAP1Q6NVH7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.71■■□□□ 1.07
SWSAP1Q6NVH7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.71■■□□□ 1.07
SWSAP1Q6NVH7 AC012306.2-201ENST00000609350 630 ntBASIC21.71■■□□□ 1.07
SWSAP1Q6NVH7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.71■■□□□ 1.07
SWSAP1Q6NVH7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.71■■□□□ 1.07
SWSAP1Q6NVH7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SWSAP1Q6NVH7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.71■■□□□ 1.07
SWSAP1Q6NVH7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SWSAP1Q6NVH7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.71■■□□□ 1.07
SWSAP1Q6NVH7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
SWSAP1Q6NVH7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SWSAP1Q6NVH7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.7■■□□□ 1.06
SWSAP1Q6NVH7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SWSAP1Q6NVH7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SWSAP1Q6NVH7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.7■■□□□ 1.06
SWSAP1Q6NVH7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.7■■□□□ 1.06
SWSAP1Q6NVH7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.7■■□□□ 1.06
SWSAP1Q6NVH7 AL160286.2-201ENST00000567150 934 ntBASIC21.7■■□□□ 1.06
SWSAP1Q6NVH7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.7■■□□□ 1.06
SWSAP1Q6NVH7 AC011298.2-201ENST00000617989 482 ntBASIC21.7■■□□□ 1.06
SWSAP1Q6NVH7 AC097493.4-201ENST00000641197 219 ntBASIC21.7■■□□□ 1.06
SWSAP1Q6NVH7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SWSAP1Q6NVH7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SWSAP1Q6NVH7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SWSAP1Q6NVH7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.7■■□□□ 1.06
SWSAP1Q6NVH7 CYP2D8P-201ENST00000433633 1490 ntBASIC21.7■■□□□ 1.06
SWSAP1Q6NVH7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SWSAP1Q6NVH7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SWSAP1Q6NVH7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.7■■□□□ 1.06
SWSAP1Q6NVH7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SWSAP1Q6NVH7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
SWSAP1Q6NVH7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SWSAP1Q6NVH7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.69■■□□□ 1.06
SWSAP1Q6NVH7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SWSAP1Q6NVH7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SWSAP1Q6NVH7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SWSAP1Q6NVH7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SWSAP1Q6NVH7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SWSAP1Q6NVH7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SWSAP1Q6NVH7 AC004951.3-201ENST00000418645 1148 ntBASIC21.69■■□□□ 1.06
SWSAP1Q6NVH7 Z85996.1-201ENST00000494644 937 ntBASIC21.69■■□□□ 1.06
SWSAP1Q6NVH7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SWSAP1Q6NVH7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SWSAP1Q6NVH7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.69■■□□□ 1.06
SWSAP1Q6NVH7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SWSAP1Q6NVH7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.69■■□□□ 1.06
SWSAP1Q6NVH7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.69■■□□□ 1.06
SWSAP1Q6NVH7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SWSAP1Q6NVH7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
SWSAP1Q6NVH7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SWSAP1Q6NVH7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SWSAP1Q6NVH7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 AC097488.1-201ENST00000507834 756 ntBASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms