Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.34■□□□□ 0.53
LPCAT4Q643R3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.34■□□□□ 0.53
LPCAT4Q643R3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.33■□□□□ 0.53
LPCAT4Q643R3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LPCAT4Q643R3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.33■□□□□ 0.53
LPCAT4Q643R3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.33■□□□□ 0.53
LPCAT4Q643R3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LPCAT4Q643R3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
LPCAT4Q643R3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LPCAT4Q643R3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LPCAT4Q643R3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LPCAT4Q643R3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.33■□□□□ 0.52
LPCAT4Q643R3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.33■□□□□ 0.52
LPCAT4Q643R3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.33■□□□□ 0.52
LPCAT4Q643R3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LPCAT4Q643R3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.33■□□□□ 0.52
LPCAT4Q643R3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LPCAT4Q643R3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LPCAT4Q643R3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LPCAT4Q643R3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LPCAT4Q643R3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LPCAT4Q643R3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.33■□□□□ 0.52
LPCAT4Q643R3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LPCAT4Q643R3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.33■□□□□ 0.52
LPCAT4Q643R3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
LPCAT4Q643R3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LPCAT4Q643R3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.33■□□□□ 0.52
LPCAT4Q643R3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.33■□□□□ 0.52
LPCAT4Q643R3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.32■□□□□ 0.52
LPCAT4Q643R3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT4Q643R3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LPCAT4Q643R3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LPCAT4Q643R3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT4Q643R3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LPCAT4Q643R3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
LPCAT4Q643R3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LPCAT4Q643R3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT4Q643R3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT4Q643R3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT4Q643R3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT4Q643R3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT4Q643R3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT4Q643R3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT4Q643R3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT4Q643R3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.32■□□□□ 0.52
LPCAT4Q643R3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LPCAT4Q643R3 AL512353.2-201ENST00000448759 1962 ntBASIC18.31■□□□□ 0.52
LPCAT4Q643R3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT4Q643R3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LPCAT4Q643R3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT4Q643R3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.31■□□□□ 0.52
LPCAT4Q643R3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.31■□□□□ 0.52
LPCAT4Q643R3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.31■□□□□ 0.52
LPCAT4Q643R3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.31■□□□□ 0.52
LPCAT4Q643R3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT4Q643R3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.31■□□□□ 0.52
LPCAT4Q643R3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT4Q643R3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT4Q643R3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LPCAT4Q643R3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LPCAT4Q643R3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LPCAT4Q643R3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.31■□□□□ 0.52
LPCAT4Q643R3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 AC007322.3-201ENST00000426526 701 ntBASIC18.3■□□□□ 0.52
LPCAT4Q643R3 AL356441.2-201ENST00000443009 864 ntBASIC18.3■□□□□ 0.52
LPCAT4Q643R3 AC233992.3-201ENST00000607491 485 ntBASIC18.3■□□□□ 0.52
LPCAT4Q643R3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 AC120498.10-201ENST00000621827 505 ntBASIC18.3■□□□□ 0.52
LPCAT4Q643R3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT4Q643R3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms