Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CDC42BPAQ5VT25 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC29.59■■■□□ 2.33
CDC42BPAQ5VT25 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CDC42BPAQ5VT25 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
CDC42BPAQ5VT25 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC29.59■■■□□ 2.33
CDC42BPAQ5VT25 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
CDC42BPAQ5VT25 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CDC42BPAQ5VT25 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
CDC42BPAQ5VT25 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC29.59■■■□□ 2.33
CDC42BPAQ5VT25 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC29.59■■■□□ 2.33
CDC42BPAQ5VT25 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC29.59■■■□□ 2.33
CDC42BPAQ5VT25 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
CDC42BPAQ5VT25 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
CDC42BPAQ5VT25 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC29.58■■■□□ 2.33
CDC42BPAQ5VT25 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC29.58■■■□□ 2.33
CDC42BPAQ5VT25 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
CDC42BPAQ5VT25 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
CDC42BPAQ5VT25 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC29.58■■■□□ 2.33
CDC42BPAQ5VT25 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC29.58■■■□□ 2.33
CDC42BPAQ5VT25 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC29.58■■■□□ 2.33
CDC42BPAQ5VT25 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC29.58■■■□□ 2.33
CDC42BPAQ5VT25 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC29.58■■■□□ 2.33
CDC42BPAQ5VT25 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC29.58■■■□□ 2.33
CDC42BPAQ5VT25 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.32
CDC42BPAQ5VT25 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
CDC42BPAQ5VT25 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC29.57■■■□□ 2.32
CDC42BPAQ5VT25 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC29.57■■■□□ 2.32
CDC42BPAQ5VT25 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CDC42BPAQ5VT25 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC29.57■■■□□ 2.32
CDC42BPAQ5VT25 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC29.57■■■□□ 2.32
CDC42BPAQ5VT25 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC29.57■■■□□ 2.32
CDC42BPAQ5VT25 TBC1D3P2-202ENST00000577902 1649 ntBASIC29.57■■■□□ 2.32
CDC42BPAQ5VT25 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
CDC42BPAQ5VT25 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CDC42BPAQ5VT25 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC29.57■■■□□ 2.32
CDC42BPAQ5VT25 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CDC42BPAQ5VT25 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CDC42BPAQ5VT25 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC29.57■■■□□ 2.32
CDC42BPAQ5VT25 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CDC42BPAQ5VT25 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CDC42BPAQ5VT25 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC29.57■■■□□ 2.32
CDC42BPAQ5VT25 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC29.57■■■□□ 2.32
CDC42BPAQ5VT25 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC29.57■■■□□ 2.32
CDC42BPAQ5VT25 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC29.57■■■□□ 2.32
CDC42BPAQ5VT25 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CDC42BPAQ5VT25 HYMAI.1-201ENST00000620949 238 ntBASIC29.57■■■□□ 2.32
CDC42BPAQ5VT25 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC29.56■■■□□ 2.32
CDC42BPAQ5VT25 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC29.56■■■□□ 2.32
CDC42BPAQ5VT25 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
CDC42BPAQ5VT25 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
CDC42BPAQ5VT25 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC29.56■■■□□ 2.32
CDC42BPAQ5VT25 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
CDC42BPAQ5VT25 AC073314.1-201ENST00000568729 2216 ntBASIC29.56■■■□□ 2.32
CDC42BPAQ5VT25 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC29.56■■■□□ 2.32
CDC42BPAQ5VT25 STARP1-201ENST00000397973 869 ntBASIC29.56■■■□□ 2.32
CDC42BPAQ5VT25 ZNF444P1-201ENST00000559497 298 ntBASIC29.56■■■□□ 2.32
CDC42BPAQ5VT25 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CDC42BPAQ5VT25 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
CDC42BPAQ5VT25 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CDC42BPAQ5VT25 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC29.55■■■□□ 2.32
CDC42BPAQ5VT25 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CDC42BPAQ5VT25 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CDC42BPAQ5VT25 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CDC42BPAQ5VT25 Telomerase-vert.1-201ENST00000363312 438 ntBASIC29.55■■■□□ 2.32
CDC42BPAQ5VT25 VENTXP5-201ENST00000523979 775 ntBASIC29.55■■■□□ 2.32
CDC42BPAQ5VT25 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CDC42BPAQ5VT25 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC29.55■■■□□ 2.32
CDC42BPAQ5VT25 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC29.55■■■□□ 2.32
CDC42BPAQ5VT25 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC29.55■■■□□ 2.32
CDC42BPAQ5VT25 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC29.55■■■□□ 2.32
CDC42BPAQ5VT25 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CDC42BPAQ5VT25 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CDC42BPAQ5VT25 AL691432.2-201ENST00000607222 2038 ntBASIC29.55■■■□□ 2.32
CDC42BPAQ5VT25 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CDC42BPAQ5VT25 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CDC42BPAQ5VT25 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC29.54■■■□□ 2.32
CDC42BPAQ5VT25 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC29.54■■■□□ 2.32
CDC42BPAQ5VT25 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CDC42BPAQ5VT25 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CDC42BPAQ5VT25 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CDC42BPAQ5VT25 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
CDC42BPAQ5VT25 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CDC42BPAQ5VT25 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC29.54■■■□□ 2.32
CDC42BPAQ5VT25 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC29.54■■■□□ 2.32
CDC42BPAQ5VT25 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC29.54■■■□□ 2.32
CDC42BPAQ5VT25 AP005212.1-201ENST00000581547 1997 ntBASIC29.54■■■□□ 2.32
CDC42BPAQ5VT25 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC29.54■■■□□ 2.32
CDC42BPAQ5VT25 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
CDC42BPAQ5VT25 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CDC42BPAQ5VT25 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CDC42BPAQ5VT25 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC29.54■■■□□ 2.32
CDC42BPAQ5VT25 AC020907.5-201ENST00000624372 1936 ntBASIC29.54■■■□□ 2.32
CDC42BPAQ5VT25 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CDC42BPAQ5VT25 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC29.54■■■□□ 2.32
CDC42BPAQ5VT25 CNP-204ENST00000472031 1019 ntTSL 2 BASIC29.54■■■□□ 2.32
CDC42BPAQ5VT25 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC29.54■■■□□ 2.32
CDC42BPAQ5VT25 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CDC42BPAQ5VT25 DFFB-212ENST00000625756 649 ntTSL 5 BASIC29.54■■■□□ 2.32
CDC42BPAQ5VT25 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CDC42BPAQ5VT25 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms