Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RIF1Q5UIP0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.97■□□□□ 0.63
RIF1Q5UIP0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RIF1Q5UIP0 TSPY22P-201ENST00000427496 604 ntBASIC18.97■□□□□ 0.63
RIF1Q5UIP0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RIF1Q5UIP0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
RIF1Q5UIP0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RIF1Q5UIP0 C9orf163-202ENST00000624034 2573 ntBASIC18.97■□□□□ 0.63
RIF1Q5UIP0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RIF1Q5UIP0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.97■□□□□ 0.63
RIF1Q5UIP0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RIF1Q5UIP0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RIF1Q5UIP0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RIF1Q5UIP0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 KRT8P17-201ENST00000453110 1448 ntBASIC18.96■□□□□ 0.63
RIF1Q5UIP0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.96■□□□□ 0.63
RIF1Q5UIP0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RIF1Q5UIP0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RIF1Q5UIP0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RIF1Q5UIP0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.95■□□□□ 0.62
RIF1Q5UIP0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.95■□□□□ 0.62
RIF1Q5UIP0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.95■□□□□ 0.62
RIF1Q5UIP0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RIF1Q5UIP0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.95■□□□□ 0.62
RIF1Q5UIP0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RIF1Q5UIP0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.95■□□□□ 0.62
RIF1Q5UIP0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RIF1Q5UIP0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RIF1Q5UIP0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.95■□□□□ 0.62
RIF1Q5UIP0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.95■□□□□ 0.62
RIF1Q5UIP0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.95■□□□□ 0.62
RIF1Q5UIP0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.95■□□□□ 0.62
RIF1Q5UIP0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RIF1Q5UIP0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RIF1Q5UIP0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RIF1Q5UIP0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RIF1Q5UIP0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
RIF1Q5UIP0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RIF1Q5UIP0 AL035633.1-201ENST00000406139 838 ntBASIC18.94■□□□□ 0.62
RIF1Q5UIP0 TOB2P1-201ENST00000469761 992 ntBASIC18.94■□□□□ 0.62
RIF1Q5UIP0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RIF1Q5UIP0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.94■□□□□ 0.62
RIF1Q5UIP0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RIF1Q5UIP0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RIF1Q5UIP0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RIF1Q5UIP0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RIF1Q5UIP0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.94■□□□□ 0.62
RIF1Q5UIP0 LINC00167-201ENST00000530583 1419 ntBASIC18.94■□□□□ 0.62
RIF1Q5UIP0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.94■□□□□ 0.62
RIF1Q5UIP0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RIF1Q5UIP0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.94■□□□□ 0.62
RIF1Q5UIP0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RIF1Q5UIP0 FOSL1P1-201ENST00000511041 816 ntBASIC18.94■□□□□ 0.62
RIF1Q5UIP0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RIF1Q5UIP0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RIF1Q5UIP0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.94■□□□□ 0.62
RIF1Q5UIP0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RIF1Q5UIP0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RIF1Q5UIP0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
RIF1Q5UIP0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RIF1Q5UIP0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.93■□□□□ 0.62
RIF1Q5UIP0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RIF1Q5UIP0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.93■□□□□ 0.62
RIF1Q5UIP0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RIF1Q5UIP0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.93■□□□□ 0.62
RIF1Q5UIP0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RIF1Q5UIP0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.93■□□□□ 0.62
RIF1Q5UIP0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.93■□□□□ 0.62
RIF1Q5UIP0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.93■□□□□ 0.62
RIF1Q5UIP0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RIF1Q5UIP0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RIF1Q5UIP0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.93■□□□□ 0.62
RIF1Q5UIP0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RIF1Q5UIP0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.93■□□□□ 0.62
RIF1Q5UIP0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RIF1Q5UIP0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms