Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDCD4Q53EL6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDCD4Q53EL6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDCD4Q53EL6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDCD4Q53EL6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.69■□□□□ 0.58
PDCD4Q53EL6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.69■□□□□ 0.58
PDCD4Q53EL6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.69■□□□□ 0.58
PDCD4Q53EL6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.69■□□□□ 0.58
PDCD4Q53EL6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PDCD4Q53EL6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PDCD4Q53EL6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.69■□□□□ 0.58
PDCD4Q53EL6 AC141586.3-201ENST00000562166 1838 ntBASIC18.69■□□□□ 0.58
PDCD4Q53EL6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.69■□□□□ 0.58
PDCD4Q53EL6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDCD4Q53EL6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.69■□□□□ 0.58
PDCD4Q53EL6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDCD4Q53EL6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD4Q53EL6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 TEX21P-204ENST00000641479 1693 ntBASIC18.67■□□□□ 0.58
PDCD4Q53EL6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 AC093787.1-201ENST00000450396 207 ntBASIC18.67■□□□□ 0.58
PDCD4Q53EL6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.67■□□□□ 0.58
PDCD4Q53EL6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDCD4Q53EL6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.66■□□□□ 0.58
PDCD4Q53EL6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PDCD4Q53EL6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.66■□□□□ 0.58
PDCD4Q53EL6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.66■□□□□ 0.58
PDCD4Q53EL6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDCD4Q53EL6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDCD4Q53EL6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDCD4Q53EL6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDCD4Q53EL6 GPX1P1-201ENST00000388829 606 ntBASIC18.66■□□□□ 0.58
PDCD4Q53EL6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.66■□□□□ 0.58
PDCD4Q53EL6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDCD4Q53EL6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDCD4Q53EL6 TFP1-202ENST00000475455 1573 ntBASIC18.66■□□□□ 0.58
PDCD4Q53EL6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PDCD4Q53EL6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
PDCD4Q53EL6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDCD4Q53EL6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDCD4Q53EL6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PDCD4Q53EL6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.66■□□□□ 0.58
PDCD4Q53EL6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms