Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 LINC01465-201ENST00000408887 1940 ntBASIC34.42■■■■□ 3.1
HMGXB3Q12766 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC34.42■■■■□ 3.1
HMGXB3Q12766 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
HMGXB3Q12766 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
HMGXB3Q12766 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
HMGXB3Q12766 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC34.41■■■■□ 3.1
HMGXB3Q12766 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC34.41■■■■□ 3.1
HMGXB3Q12766 BX276092.5-203ENST00000456199 560 ntBASIC34.41■■■■□ 3.1
HMGXB3Q12766 AP002414.4-201ENST00000589764 1148 ntBASIC34.41■■■■□ 3.1
HMGXB3Q12766 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC34.41■■■■□ 3.1
HMGXB3Q12766 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC34.41■■■■□ 3.1
HMGXB3Q12766 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
HMGXB3Q12766 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
HMGXB3Q12766 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC34.41■■■■□ 3.1
HMGXB3Q12766 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC34.41■■■■□ 3.1
HMGXB3Q12766 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
HMGXB3Q12766 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC34.41■■■■□ 3.1
HMGXB3Q12766 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
HMGXB3Q12766 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC34.41■■■■□ 3.1
HMGXB3Q12766 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
HMGXB3Q12766 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
HMGXB3Q12766 TSPY12P-201ENST00000421279 868 ntBASIC34.4■■■■□ 3.1
HMGXB3Q12766 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC34.4■■■■□ 3.1
HMGXB3Q12766 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC34.4■■■■□ 3.1
HMGXB3Q12766 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC34.4■■■■□ 3.1
HMGXB3Q12766 TPSP2-201ENST00000561760 610 ntBASIC34.4■■■■□ 3.1
HMGXB3Q12766 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC34.4■■■■□ 3.1
HMGXB3Q12766 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC34.4■■■■□ 3.1
HMGXB3Q12766 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
HMGXB3Q12766 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC34.4■■■■□ 3.1
HMGXB3Q12766 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
HMGXB3Q12766 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
HMGXB3Q12766 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
HMGXB3Q12766 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
HMGXB3Q12766 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
HMGXB3Q12766 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC34.39■■■■□ 3.1
HMGXB3Q12766 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
HMGXB3Q12766 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC34.39■■■■□ 3.1
HMGXB3Q12766 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
HMGXB3Q12766 CHCHD2P8-201ENST00000429873 447 ntBASIC34.39■■■■□ 3.1
HMGXB3Q12766 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC34.39■■■■□ 3.1
HMGXB3Q12766 AC034232.1-201ENST00000506026 1064 ntBASIC34.39■■■■□ 3.1
HMGXB3Q12766 TBC1D3P2-202ENST00000577902 1649 ntBASIC34.39■■■■□ 3.1
HMGXB3Q12766 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC34.39■■■■□ 3.1
HMGXB3Q12766 AC233723.2-201ENST00000623798 2106 ntBASIC34.38■■■■□ 3.09
HMGXB3Q12766 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
HMGXB3Q12766 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
HMGXB3Q12766 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC34.38■■■■□ 3.09
HMGXB3Q12766 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC34.38■■■■□ 3.09
HMGXB3Q12766 AL160237.2-201ENST00000556165 472 ntBASIC34.38■■■■□ 3.09
HMGXB3Q12766 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC34.38■■■■□ 3.09
HMGXB3Q12766 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC34.38■■■■□ 3.09
HMGXB3Q12766 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
HMGXB3Q12766 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
HMGXB3Q12766 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC34.37■■■■□ 3.09
HMGXB3Q12766 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
HMGXB3Q12766 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
HMGXB3Q12766 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
HMGXB3Q12766 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
HMGXB3Q12766 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
HMGXB3Q12766 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC34.37■■■■□ 3.09
HMGXB3Q12766 AC011498.5-201ENST00000592027 486 ntBASIC34.37■■■■□ 3.09
HMGXB3Q12766 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC34.37■■■■□ 3.09
HMGXB3Q12766 CASK-201ENST00000378154 2494 ntTSL 5 BASIC34.37■■■■□ 3.09
HMGXB3Q12766 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
HMGXB3Q12766 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC34.37■■■■□ 3.09
HMGXB3Q12766 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC34.37■■■■□ 3.09
HMGXB3Q12766 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
HMGXB3Q12766 LSR-203ENST00000360798 1963 ntTSL 2 BASIC34.37■■■■□ 3.09
HMGXB3Q12766 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
HMGXB3Q12766 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC34.36■■■■□ 3.09
HMGXB3Q12766 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
HMGXB3Q12766 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
HMGXB3Q12766 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC34.36■■■■□ 3.09
HMGXB3Q12766 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC34.36■■■■□ 3.09
HMGXB3Q12766 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC34.36■■■■□ 3.09
HMGXB3Q12766 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC34.36■■■■□ 3.09
HMGXB3Q12766 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC34.36■■■■□ 3.09
HMGXB3Q12766 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC34.36■■■■□ 3.09
HMGXB3Q12766 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
HMGXB3Q12766 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC34.35■■■■□ 3.09
HMGXB3Q12766 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC34.35■■■■□ 3.09
HMGXB3Q12766 AP002469.2-201ENST00000531724 424 ntBASIC34.35■■■■□ 3.09
HMGXB3Q12766 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC34.35■■■■□ 3.09
HMGXB3Q12766 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC34.35■■■■□ 3.09
HMGXB3Q12766 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC34.35■■■■□ 3.09
HMGXB3Q12766 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
HMGXB3Q12766 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
HMGXB3Q12766 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC34.35■■■■□ 3.09
HMGXB3Q12766 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
HMGXB3Q12766 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
HMGXB3Q12766 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
HMGXB3Q12766 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC34.34■■■■□ 3.09
HMGXB3Q12766 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC34.34■■■■□ 3.09
HMGXB3Q12766 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC34.34■■■■□ 3.09
HMGXB3Q12766 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC34.34■■■■□ 3.09
HMGXB3Q12766 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
HMGXB3Q12766 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC34.34■■■■□ 3.09
HMGXB3Q12766 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC34.34■■■■□ 3.09
HMGXB3Q12766 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC34.34■■■■□ 3.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms