Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 RPS2P4-201ENST00000476944 856 ntBASIC16.74■□□□□ 0.27
UBA52P62987 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.74■□□□□ 0.27
UBA52P62987 AP003097.1-201ENST00000530657 1135 ntBASIC16.74■□□□□ 0.27
UBA52P62987 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.74■□□□□ 0.27
UBA52P62987 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBA52P62987 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBA52P62987 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBA52P62987 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBA52P62987 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBA52P62987 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
UBA52P62987 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.74■□□□□ 0.27
UBA52P62987 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBA52P62987 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBA52P62987 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBA52P62987 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBA52P62987 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.74■□□□□ 0.27
UBA52P62987 AC003102.1-202ENST00000563394 1796 ntBASIC16.74■□□□□ 0.27
UBA52P62987 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.74■□□□□ 0.27
UBA52P62987 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBA52P62987 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBA52P62987 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBA52P62987 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBA52P62987 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.73■□□□□ 0.27
UBA52P62987 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBA52P62987 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBA52P62987 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
UBA52P62987 AC061975.6-201ENST00000579045 1553 ntBASIC16.73■□□□□ 0.27
UBA52P62987 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
UBA52P62987 AL138781.2-201ENST00000617896 1843 ntBASIC16.73■□□□□ 0.27
UBA52P62987 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
UBA52P62987 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.73■□□□□ 0.27
UBA52P62987 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBA52P62987 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBA52P62987 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.73■□□□□ 0.27
UBA52P62987 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBA52P62987 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBA52P62987 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBA52P62987 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBA52P62987 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.73■□□□□ 0.27
UBA52P62987 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
UBA52P62987 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBA52P62987 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBA52P62987 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBA52P62987 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
UBA52P62987 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBA52P62987 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
UBA52P62987 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBA52P62987 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
UBA52P62987 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBA52P62987 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
UBA52P62987 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
UBA52P62987 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBA52P62987 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBA52P62987 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.72■□□□□ 0.27
UBA52P62987 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBA52P62987 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBA52P62987 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBA52P62987 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
UBA52P62987 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
UBA52P62987 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
UBA52P62987 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBA52P62987 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
UBA52P62987 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBA52P62987 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBA52P62987 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.72■□□□□ 0.27
UBA52P62987 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBA52P62987 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
UBA52P62987 AL596275.1-201ENST00000423464 877 ntBASIC16.72■□□□□ 0.27
UBA52P62987 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBA52P62987 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.72■□□□□ 0.27
UBA52P62987 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.72■□□□□ 0.27
UBA52P62987 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBA52P62987 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.72■□□□□ 0.27
UBA52P62987 UNC93B4-201ENST00000505679 747 ntBASIC16.72■□□□□ 0.27
UBA52P62987 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
UBA52P62987 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
UBA52P62987 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.72■□□□□ 0.27
UBA52P62987 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBA52P62987 AC073648.6-201ENST00000641589 218 ntBASIC16.72■□□□□ 0.27
UBA52P62987 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBA52P62987 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBA52P62987 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.72■□□□□ 0.27
UBA52P62987 AIRN-201ENST00000601203 4374 ntBASIC16.72■□□□□ 0.27
UBA52P62987 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBA52P62987 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBA52P62987 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBA52P62987 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
UBA52P62987 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBA52P62987 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.71■□□□□ 0.27
UBA52P62987 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
UBA52P62987 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBA52P62987 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
UBA52P62987 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBA52P62987 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBA52P62987 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
UBA52P62987 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.71■□□□□ 0.27
UBA52P62987 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.71■□□□□ 0.27
UBA52P62987 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.71■□□□□ 0.27
UBA52P62987 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.71■□□□□ 0.27
UBA52P62987 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms