Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.99■□□□□ 0.31
SEC61A1P61619 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
SEC61A1P61619 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SEC61A1P61619 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SEC61A1P61619 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SEC61A1P61619 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SEC61A1P61619 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.99■□□□□ 0.31
SEC61A1P61619 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.99■□□□□ 0.31
SEC61A1P61619 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SEC61A1P61619 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SEC61A1P61619 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SEC61A1P61619 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.99■□□□□ 0.31
SEC61A1P61619 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
SEC61A1P61619 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.99■□□□□ 0.31
SEC61A1P61619 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SEC61A1P61619 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.99■□□□□ 0.31
SEC61A1P61619 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SEC61A1P61619 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SEC61A1P61619 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SEC61A1P61619 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SEC61A1P61619 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SEC61A1P61619 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SEC61A1P61619 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.98■□□□□ 0.31
SEC61A1P61619 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.98■□□□□ 0.31
SEC61A1P61619 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SEC61A1P61619 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SEC61A1P61619 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SEC61A1P61619 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SEC61A1P61619 AC087633.2-202ENST00000565166 1439 ntBASIC16.98■□□□□ 0.31
SEC61A1P61619 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SEC61A1P61619 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SEC61A1P61619 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SEC61A1P61619 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SEC61A1P61619 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SEC61A1P61619 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.98■□□□□ 0.31
SEC61A1P61619 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.98■□□□□ 0.31
SEC61A1P61619 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.98■□□□□ 0.31
SEC61A1P61619 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.98■□□□□ 0.31
SEC61A1P61619 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SEC61A1P61619 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SEC61A1P61619 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SEC61A1P61619 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.98■□□□□ 0.31
SEC61A1P61619 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SEC61A1P61619 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SEC61A1P61619 AC120498.9-201ENST00000339021 3867 ntBASIC16.98■□□□□ 0.31
SEC61A1P61619 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SEC61A1P61619 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SEC61A1P61619 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SEC61A1P61619 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SEC61A1P61619 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SEC61A1P61619 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.97■□□□□ 0.31
SEC61A1P61619 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SEC61A1P61619 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SEC61A1P61619 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SEC61A1P61619 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.97■□□□□ 0.31
SEC61A1P61619 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SEC61A1P61619 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SEC61A1P61619 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SEC61A1P61619 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SEC61A1P61619 FAM201B-201ENST00000458407 597 ntBASIC16.97■□□□□ 0.31
SEC61A1P61619 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
SEC61A1P61619 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.97■□□□□ 0.31
SEC61A1P61619 MIR2861-201ENST00000636310 90 ntBASIC16.97■□□□□ 0.31
SEC61A1P61619 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SEC61A1P61619 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SEC61A1P61619 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SEC61A1P61619 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SEC61A1P61619 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SEC61A1P61619 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SEC61A1P61619 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SEC61A1P61619 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
SEC61A1P61619 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SEC61A1P61619 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SEC61A1P61619 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.97■□□□□ 0.31
SEC61A1P61619 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEC61A1P61619 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.96■□□□□ 0.31
SEC61A1P61619 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SEC61A1P61619 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEC61A1P61619 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEC61A1P61619 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEC61A1P61619 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SEC61A1P61619 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SEC61A1P61619 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.96■□□□□ 0.31
SEC61A1P61619 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEC61A1P61619 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SEC61A1P61619 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.96■□□□□ 0.31
SEC61A1P61619 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEC61A1P61619 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEC61A1P61619 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEC61A1P61619 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.96■□□□□ 0.31
SEC61A1P61619 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
SEC61A1P61619 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.96■□□□□ 0.31
SEC61A1P61619 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEC61A1P61619 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SEC61A1P61619 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
SEC61A1P61619 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.96■□□□□ 0.31
SEC61A1P61619 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEC61A1P61619 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEC61A1P61619 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SEC61A1P61619 LTB4R2-202ENST00000528054 3092 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms