Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH13P55290 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CDH13P55290 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH13P55290 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH13P55290 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CDH13P55290 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH13P55290 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CDH13P55290 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH13P55290 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH13P55290 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CDH13P55290 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH13P55290 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDH13P55290 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH13P55290 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDH13P55290 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.02■□□□□ 0.64
CDH13P55290 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.02■□□□□ 0.64
CDH13P55290 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDH13P55290 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CDH13P55290 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.02■□□□□ 0.64
CDH13P55290 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.02■□□□□ 0.64
CDH13P55290 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH13P55290 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDH13P55290 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH13P55290 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CDH13P55290 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDH13P55290 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CDH13P55290 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDH13P55290 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.02■□□□□ 0.63
CDH13P55290 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CDH13P55290 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH13P55290 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH13P55290 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH13P55290 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH13P55290 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH13P55290 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CDH13P55290 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH13P55290 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH13P55290 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH13P55290 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH13P55290 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CDH13P55290 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH13P55290 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CDH13P55290 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.01■□□□□ 0.63
CDH13P55290 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH13P55290 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.01■□□□□ 0.63
CDH13P55290 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH13P55290 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.01■□□□□ 0.63
CDH13P55290 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH13P55290 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH13P55290 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CDH13P55290 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
CDH13P55290 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH13P55290 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH13P55290 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH13P55290 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH13P55290 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH13P55290 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH13P55290 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19■□□□□ 0.63
CDH13P55290 AC020763.4-201ENST00000623414 4170 ntBASIC19■□□□□ 0.63
CDH13P55290 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19■□□□□ 0.63
CDH13P55290 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
CDH13P55290 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH13P55290 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19■□□□□ 0.63
CDH13P55290 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19■□□□□ 0.63
CDH13P55290 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH13P55290 RER1-204ENST00000378518 522 ntTSL 3 BASIC19■□□□□ 0.63
CDH13P55290 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH13P55290 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19■□□□□ 0.63
CDH13P55290 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19■□□□□ 0.63
CDH13P55290 AC073210.2-201ENST00000430369 194 ntBASIC19■□□□□ 0.63
CDH13P55290 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19■□□□□ 0.63
CDH13P55290 AC091874.3-201ENST00000512672 1195 ntBASIC19■□□□□ 0.63
CDH13P55290 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19■□□□□ 0.63
CDH13P55290 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CDH13P55290 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19■□□□□ 0.63
CDH13P55290 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19■□□□□ 0.63
CDH13P55290 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CDH13P55290 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CDH13P55290 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH13P55290 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CDH13P55290 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH13P55290 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH13P55290 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19■□□□□ 0.63
CDH13P55290 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH13P55290 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH13P55290 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH13P55290 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.99■□□□□ 0.63
CDH13P55290 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH13P55290 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CDH13P55290 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.99■□□□□ 0.63
CDH13P55290 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CDH13P55290 GUSBP6-202ENST00000438529 1198 ntBASIC18.99■□□□□ 0.63
CDH13P55290 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.99■□□□□ 0.63
CDH13P55290 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.99■□□□□ 0.63
CDH13P55290 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.99■□□□□ 0.63
CDH13P55290 AC092118.2-201ENST00000613495 667 ntBASIC18.99■□□□□ 0.63
CDH13P55290 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH13P55290 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH13P55290 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH13P55290 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms