Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.61■□□□□ 0.73
LIMK2P53671 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
LIMK2P53671 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK2P53671 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.61■□□□□ 0.73
LIMK2P53671 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.61■□□□□ 0.73
LIMK2P53671 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
LIMK2P53671 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK2P53671 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK2P53671 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK2P53671 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK2P53671 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK2P53671 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LIMK2P53671 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK2P53671 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.61■□□□□ 0.73
LIMK2P53671 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.61■□□□□ 0.73
LIMK2P53671 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK2P53671 POM121L13P-201ENST00000422362 380 ntBASIC19.61■□□□□ 0.73
LIMK2P53671 AL596275.1-201ENST00000423464 877 ntBASIC19.61■□□□□ 0.73
LIMK2P53671 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK2P53671 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.61■□□□□ 0.73
LIMK2P53671 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.61■□□□□ 0.73
LIMK2P53671 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK2P53671 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.61■□□□□ 0.73
LIMK2P53671 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.61■□□□□ 0.73
LIMK2P53671 AC069544.1-201ENST00000609399 999 ntBASIC19.61■□□□□ 0.73
LIMK2P53671 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK2P53671 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK2P53671 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK2P53671 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
LIMK2P53671 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK2P53671 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK2P53671 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK2P53671 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.61■□□□□ 0.73
LIMK2P53671 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.61■□□□□ 0.73
LIMK2P53671 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK2P53671 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LIMK2P53671 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK2P53671 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LIMK2P53671 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.61■□□□□ 0.73
LIMK2P53671 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK2P53671 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LIMK2P53671 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.6■□□□□ 0.73
LIMK2P53671 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.6■□□□□ 0.73
LIMK2P53671 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
LIMK2P53671 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
LIMK2P53671 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LIMK2P53671 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LIMK2P53671 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LIMK2P53671 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LIMK2P53671 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LIMK2P53671 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LIMK2P53671 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
LIMK2P53671 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.6■□□□□ 0.73
LIMK2P53671 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LIMK2P53671 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LIMK2P53671 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.6■□□□□ 0.73
LIMK2P53671 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.6■□□□□ 0.73
LIMK2P53671 AC233263.1-201ENST00000578059 224 ntBASIC19.6■□□□□ 0.73
LIMK2P53671 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.6■□□□□ 0.73
LIMK2P53671 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LIMK2P53671 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.6■□□□□ 0.73
LIMK2P53671 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.6■□□□□ 0.73
LIMK2P53671 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LIMK2P53671 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.6■□□□□ 0.73
LIMK2P53671 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.6■□□□□ 0.73
LIMK2P53671 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LIMK2P53671 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
LIMK2P53671 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.59■□□□□ 0.73
LIMK2P53671 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.59■□□□□ 0.73
LIMK2P53671 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.59■□□□□ 0.73
LIMK2P53671 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LIMK2P53671 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LIMK2P53671 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LIMK2P53671 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.59■□□□□ 0.73
LIMK2P53671 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.59■□□□□ 0.73
LIMK2P53671 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.59■□□□□ 0.73
LIMK2P53671 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.59■□□□□ 0.73
LIMK2P53671 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
LIMK2P53671 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.59■□□□□ 0.73
LIMK2P53671 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LIMK2P53671 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.59■□□□□ 0.73
LIMK2P53671 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LIMK2P53671 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LIMK2P53671 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.59■□□□□ 0.73
LIMK2P53671 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LIMK2P53671 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.59■□□□□ 0.73
LIMK2P53671 AC018553.1-201ENST00000616682 1458 ntBASIC19.59■□□□□ 0.73
LIMK2P53671 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
LIMK2P53671 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
LIMK2P53671 AC116351.2-201ENST00000606540 1585 ntBASIC19.58■□□□□ 0.73
LIMK2P53671 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.58■□□□□ 0.73
LIMK2P53671 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
LIMK2P53671 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LIMK2P53671 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LIMK2P53671 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.58■□□□□ 0.73
LIMK2P53671 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
LIMK2P53671 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.58■□□□□ 0.72
LIMK2P53671 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.58■□□□□ 0.72
LIMK2P53671 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
LIMK2P53671 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms