Protein–RNA interactions for Protein: P50750

CDK9, Cyclin-dependent kinase 9, humanhuman

Known RBP Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9P50750 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK9P50750 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CDK9P50750 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.7■□□□□ 0.58
CDK9P50750 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK9P50750 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.7■□□□□ 0.58
CDK9P50750 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.7■□□□□ 0.58
CDK9P50750 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDK9P50750 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.7■□□□□ 0.58
CDK9P50750 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDK9P50750 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK9P50750 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.7■□□□□ 0.58
CDK9P50750 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDK9P50750 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK9P50750 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.7■□□□□ 0.58
CDK9P50750 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK9P50750 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDK9P50750 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CDK9P50750 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK9P50750 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CDK9P50750 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK9P50750 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.69■□□□□ 0.58
CDK9P50750 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
CDK9P50750 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.69■□□□□ 0.58
CDK9P50750 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK9P50750 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDK9P50750 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDK9P50750 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK9P50750 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK9P50750 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK9P50750 HLA-G-202ENST00000376815 851 ntBASIC18.69■□□□□ 0.58
CDK9P50750 HLA-G-203ENST00000376818 1127 ntBASIC18.69■□□□□ 0.58
CDK9P50750 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK9P50750 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.69■□□□□ 0.58
CDK9P50750 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.69■□□□□ 0.58
CDK9P50750 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK9P50750 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDK9P50750 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.69■□□□□ 0.58
CDK9P50750 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CDK9P50750 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CDK9P50750 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK9P50750 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDK9P50750 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK9P50750 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDK9P50750 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.69■□□□□ 0.58
CDK9P50750 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK9P50750 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK9P50750 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
CDK9P50750 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK9P50750 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK9P50750 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK9P50750 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK9P50750 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.68■□□□□ 0.58
CDK9P50750 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK9P50750 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK9P50750 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK9P50750 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.68■□□□□ 0.58
CDK9P50750 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK9P50750 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDK9P50750 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDK9P50750 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.68■□□□□ 0.58
CDK9P50750 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.68■□□□□ 0.58
CDK9P50750 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.68■□□□□ 0.58
CDK9P50750 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDK9P50750 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.68■□□□□ 0.58
CDK9P50750 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
CDK9P50750 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.68■□□□□ 0.58
CDK9P50750 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.68■□□□□ 0.58
CDK9P50750 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.68■□□□□ 0.58
CDK9P50750 AC023632.3-201ENST00000521633 145 ntBASIC18.68■□□□□ 0.58
CDK9P50750 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.68■□□□□ 0.58
CDK9P50750 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDK9P50750 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDK9P50750 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.68■□□□□ 0.58
CDK9P50750 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.68■□□□□ 0.58
CDK9P50750 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK9P50750 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK9P50750 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK9P50750 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK9P50750 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK9P50750 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.68■□□□□ 0.58
CDK9P50750 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.67■□□□□ 0.58
CDK9P50750 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK9P50750 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.67■□□□□ 0.58
CDK9P50750 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.67■□□□□ 0.58
CDK9P50750 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK9P50750 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.67■□□□□ 0.58
CDK9P50750 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK9P50750 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.67■□□□□ 0.58
CDK9P50750 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDK9P50750 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK9P50750 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDK9P50750 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK9P50750 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK9P50750 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.67■□□□□ 0.58
CDK9P50750 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.67■□□□□ 0.58
CDK9P50750 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDK9P50750 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDK9P50750 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.67■□□□□ 0.58
CDK9P50750 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.67■□□□□ 0.58
CDK9P50750 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms