Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
SRP9P49458 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRP9P49458 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.23■□□□□ 0.35
SRP9P49458 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRP9P49458 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRP9P49458 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SRP9P49458 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SRP9P49458 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRP9P49458 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRP9P49458 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SRP9P49458 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SRP9P49458 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRP9P49458 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SRP9P49458 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SRP9P49458 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.22■□□□□ 0.35
SRP9P49458 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.22■□□□□ 0.35
SRP9P49458 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRP9P49458 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.22■□□□□ 0.35
SRP9P49458 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SRP9P49458 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
SRP9P49458 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRP9P49458 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRP9P49458 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.22■□□□□ 0.35
SRP9P49458 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SRP9P49458 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRP9P49458 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SRP9P49458 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.22■□□□□ 0.35
SRP9P49458 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.22■□□□□ 0.35
SRP9P49458 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SRP9P49458 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.22■□□□□ 0.35
SRP9P49458 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SRP9P49458 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.22■□□□□ 0.35
SRP9P49458 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.22■□□□□ 0.35
SRP9P49458 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SRP9P49458 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.22■□□□□ 0.35
SRP9P49458 AC142086.2-201ENST00000569753 217 ntBASIC17.22■□□□□ 0.35
SRP9P49458 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.22■□□□□ 0.35
SRP9P49458 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.22■□□□□ 0.35
SRP9P49458 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.22■□□□□ 0.35
SRP9P49458 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.22■□□□□ 0.35
SRP9P49458 LTB4R2-202ENST00000528054 3092 ntBASIC17.22■□□□□ 0.35
SRP9P49458 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SRP9P49458 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRP9P49458 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.22■□□□□ 0.35
SRP9P49458 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SRP9P49458 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRP9P49458 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRP9P49458 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.22■□□□□ 0.35
SRP9P49458 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRP9P49458 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.22■□□□□ 0.35
SRP9P49458 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SRP9P49458 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SRP9P49458 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.21■□□□□ 0.35
SRP9P49458 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRP9P49458 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
SRP9P49458 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SRP9P49458 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRP9P49458 FZD10-202ENST00000539839 3282 ntBASIC17.21■□□□□ 0.35
SRP9P49458 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRP9P49458 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.21■□□□□ 0.35
SRP9P49458 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRP9P49458 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRP9P49458 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.21■□□□□ 0.35
SRP9P49458 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SRP9P49458 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRP9P49458 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.21■□□□□ 0.35
SRP9P49458 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.21■□□□□ 0.35
SRP9P49458 AC073210.2-201ENST00000430369 194 ntBASIC17.21■□□□□ 0.35
SRP9P49458 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SRP9P49458 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.21■□□□□ 0.35
SRP9P49458 AC097658.1-201ENST00000475555 843 ntBASIC17.21■□□□□ 0.35
SRP9P49458 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.21■□□□□ 0.35
SRP9P49458 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.21■□□□□ 0.35
SRP9P49458 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
SRP9P49458 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
SRP9P49458 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SRP9P49458 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
SRP9P49458 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
SRP9P49458 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SRP9P49458 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRP9P49458 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.2■□□□□ 0.34
SRP9P49458 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRP9P49458 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRP9P49458 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRP9P49458 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SRP9P49458 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SRP9P49458 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.2■□□□□ 0.34
SRP9P49458 AC018470.1-201ENST00000624790 3129 ntBASIC17.2■□□□□ 0.34
SRP9P49458 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SRP9P49458 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.2■□□□□ 0.34
SRP9P49458 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SRP9P49458 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRP9P49458 AL138781.2-201ENST00000617896 1843 ntBASIC17.2■□□□□ 0.34
SRP9P49458 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRP9P49458 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SRP9P49458 DUSP5P2-201ENST00000426873 1033 ntBASIC17.2■□□□□ 0.34
SRP9P49458 AC069152.1-201ENST00000438030 544 ntBASIC17.2■□□□□ 0.34
SRP9P49458 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.2■□□□□ 0.34
SRP9P49458 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
SRP9P49458 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms