Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CSNK1A1P48729 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1A1P48729 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1A1P48729 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1A1P48729 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.32■□□□□ 0.36
CSNK1A1P48729 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.32■□□□□ 0.36
CSNK1A1P48729 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1A1P48729 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1A1P48729 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.32■□□□□ 0.36
CSNK1A1P48729 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.32■□□□□ 0.36
CSNK1A1P48729 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.32■□□□□ 0.36
CSNK1A1P48729 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
CSNK1A1P48729 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1A1P48729 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1A1P48729 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1A1P48729 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CSNK1A1P48729 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1A1P48729 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1A1P48729 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1A1P48729 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1A1P48729 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.32■□□□□ 0.36
CSNK1A1P48729 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CSNK1A1P48729 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1A1P48729 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1A1P48729 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CSNK1A1P48729 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.31■□□□□ 0.36
CSNK1A1P48729 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CSNK1A1P48729 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1A1P48729 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1A1P48729 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1A1P48729 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1A1P48729 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1A1P48729 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1A1P48729 HCG11-201ENST00000411553 5696 ntBASIC17.31■□□□□ 0.36
CSNK1A1P48729 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1A1P48729 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CSNK1A1P48729 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1A1P48729 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1A1P48729 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1A1P48729 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.31■□□□□ 0.36
CSNK1A1P48729 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.31■□□□□ 0.36
CSNK1A1P48729 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.31■□□□□ 0.36
CSNK1A1P48729 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.31■□□□□ 0.36
CSNK1A1P48729 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.31■□□□□ 0.36
CSNK1A1P48729 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.31■□□□□ 0.36
CSNK1A1P48729 AC233263.1-201ENST00000578059 224 ntBASIC17.31■□□□□ 0.36
CSNK1A1P48729 MIR4651-201ENST00000582622 73 ntBASIC17.31■□□□□ 0.36
CSNK1A1P48729 AC006058.3-201ENST00000606217 1069 ntBASIC17.31■□□□□ 0.36
CSNK1A1P48729 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.31■□□□□ 0.36
CSNK1A1P48729 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1A1P48729 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
CSNK1A1P48729 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1A1P48729 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1A1P48729 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1A1P48729 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSNK1A1P48729 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CSNK1A1P48729 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSNK1A1P48729 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSNK1A1P48729 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSNK1A1P48729 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.3■□□□□ 0.36
CSNK1A1P48729 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSNK1A1P48729 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CSNK1A1P48729 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.3■□□□□ 0.36
CSNK1A1P48729 TUBB8P6-201ENST00000436895 1288 ntBASIC17.3■□□□□ 0.36
CSNK1A1P48729 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.3■□□□□ 0.36
CSNK1A1P48729 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.3■□□□□ 0.36
CSNK1A1P48729 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.3■□□□□ 0.36
CSNK1A1P48729 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.3■□□□□ 0.36
CSNK1A1P48729 MTDHP1-201ENST00000605323 784 ntBASIC17.3■□□□□ 0.36
CSNK1A1P48729 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSNK1A1P48729 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.3■□□□□ 0.36
CSNK1A1P48729 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CSNK1A1P48729 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSNK1A1P48729 NBPF21P-201ENST00000425093 1451 ntBASIC17.3■□□□□ 0.36
CSNK1A1P48729 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.3■□□□□ 0.36
CSNK1A1P48729 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CSNK1A1P48729 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1A1P48729 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1A1P48729 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1A1P48729 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1A1P48729 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1A1P48729 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1A1P48729 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1A1P48729 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1A1P48729 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1A1P48729 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CSNK1A1P48729 POU5F1P3-201ENST00000428824 1078 ntBASIC17.29■□□□□ 0.36
CSNK1A1P48729 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.29■□□□□ 0.36
CSNK1A1P48729 KRT18P16-201ENST00000510337 1294 ntBASIC17.29■□□□□ 0.36
CSNK1A1P48729 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.29■□□□□ 0.36
CSNK1A1P48729 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.29■□□□□ 0.36
CSNK1A1P48729 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.29■□□□□ 0.36
CSNK1A1P48729 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.29■□□□□ 0.36
CSNK1A1P48729 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1A1P48729 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.29■□□□□ 0.36
CSNK1A1P48729 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1A1P48729 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.29■□□□□ 0.36
CSNK1A1P48729 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.29■□□□□ 0.36
CSNK1A1P48729 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1A1P48729 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms