Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
PCP4P48539 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCP4P48539 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PCP4P48539 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCP4P48539 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCP4P48539 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PCP4P48539 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCP4P48539 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC13.5□□□□□ -0.25
PCP4P48539 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.5□□□□□ -0.25
PCP4P48539 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
PCP4P48539 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCP4P48539 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCP4P48539 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCP4P48539 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCP4P48539 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCP4P48539 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCP4P48539 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
PCP4P48539 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCP4P48539 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PCP4P48539 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC13.49□□□□□ -0.25
PCP4P48539 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
PCP4P48539 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCP4P48539 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.49□□□□□ -0.25
PCP4P48539 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCP4P48539 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PCP4P48539 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
PCP4P48539 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCP4P48539 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PCP4P48539 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
PCP4P48539 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
PCP4P48539 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCP4P48539 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
PCP4P48539 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCP4P48539 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCP4P48539 AC092171.3-201ENST00000610122 2651 ntBASIC13.49□□□□□ -0.25
PCP4P48539 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCP4P48539 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCP4P48539 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCP4P48539 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCP4P48539 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCP4P48539 DOC2GP-204ENST00000639052 2548 ntBASIC13.49□□□□□ -0.25
PCP4P48539 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCP4P48539 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCP4P48539 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
PCP4P48539 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCP4P48539 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCP4P48539 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCP4P48539 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
PCP4P48539 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCP4P48539 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
PCP4P48539 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCP4P48539 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCP4P48539 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCP4P48539 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCP4P48539 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCP4P48539 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.48□□□□□ -0.25
PCP4P48539 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCP4P48539 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC13.48□□□□□ -0.25
PCP4P48539 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
PCP4P48539 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.48□□□□□ -0.25
PCP4P48539 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCP4P48539 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
PCP4P48539 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCP4P48539 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCP4P48539 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCP4P48539 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
PCP4P48539 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCP4P48539 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCP4P48539 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.48□□□□□ -0.25
PCP4P48539 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.48□□□□□ -0.25
PCP4P48539 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PCP4P48539 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.48□□□□□ -0.25
PCP4P48539 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
PCP4P48539 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCP4P48539 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCP4P48539 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.48□□□□□ -0.25
PCP4P48539 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PCP4P48539 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCP4P48539 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCP4P48539 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC13.47□□□□□ -0.25
PCP4P48539 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCP4P48539 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCP4P48539 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
PCP4P48539 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCP4P48539 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PCP4P48539 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCP4P48539 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC13.47□□□□□ -0.25
PCP4P48539 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PCP4P48539 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCP4P48539 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCP4P48539 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCP4P48539 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCP4P48539 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PCP4P48539 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PCP4P48539 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCP4P48539 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCP4P48539 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
PCP4P48539 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
PCP4P48539 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCP4P48539 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms