Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX3P48380 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX3P48380 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.27■□□□□ 0.52
RFX3P48380 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX3P48380 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFX3P48380 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFX3P48380 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.27■□□□□ 0.52
RFX3P48380 AC008687.6-201ENST00000596318 630 ntBASIC18.27■□□□□ 0.52
RFX3P48380 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RFX3P48380 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFX3P48380 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX3P48380 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX3P48380 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFX3P48380 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RFX3P48380 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFX3P48380 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.26■□□□□ 0.51
RFX3P48380 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX3P48380 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX3P48380 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX3P48380 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RFX3P48380 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX3P48380 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX3P48380 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX3P48380 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
RFX3P48380 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX3P48380 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX3P48380 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX3P48380 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX3P48380 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.26■□□□□ 0.51
RFX3P48380 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RFX3P48380 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.26■□□□□ 0.51
RFX3P48380 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
RFX3P48380 UNC93B5-201ENST00000530315 699 ntBASIC18.26■□□□□ 0.51
RFX3P48380 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
RFX3P48380 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX3P48380 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.26■□□□□ 0.51
RFX3P48380 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX3P48380 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX3P48380 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX3P48380 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX3P48380 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX3P48380 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX3P48380 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX3P48380 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RFX3P48380 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX3P48380 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX3P48380 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX3P48380 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.25■□□□□ 0.51
RFX3P48380 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.25■□□□□ 0.51
RFX3P48380 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX3P48380 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX3P48380 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX3P48380 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX3P48380 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.25■□□□□ 0.51
RFX3P48380 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX3P48380 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX3P48380 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.25■□□□□ 0.51
RFX3P48380 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX3P48380 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RFX3P48380 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.25■□□□□ 0.51
RFX3P48380 UNC93B4-201ENST00000505679 747 ntBASIC18.25■□□□□ 0.51
RFX3P48380 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RFX3P48380 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX3P48380 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.25■□□□□ 0.51
RFX3P48380 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.25■□□□□ 0.51
RFX3P48380 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
RFX3P48380 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.25■□□□□ 0.51
RFX3P48380 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX3P48380 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX3P48380 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RFX3P48380 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.25■□□□□ 0.51
RFX3P48380 AC116351.2-201ENST00000606540 1585 ntBASIC18.25■□□□□ 0.51
RFX3P48380 AC009237.14-201ENST00000609975 1594 ntBASIC18.25■□□□□ 0.51
RFX3P48380 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX3P48380 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RFX3P48380 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.24■□□□□ 0.51
RFX3P48380 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RFX3P48380 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX3P48380 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX3P48380 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.24■□□□□ 0.51
RFX3P48380 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX3P48380 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFX3P48380 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX3P48380 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX3P48380 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX3P48380 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.24■□□□□ 0.51
RFX3P48380 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.24■□□□□ 0.51
RFX3P48380 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
RFX3P48380 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RFX3P48380 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFX3P48380 AC120498.8-201ENST00000614275 531 ntBASIC18.24■□□□□ 0.51
RFX3P48380 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.24■□□□□ 0.51
RFX3P48380 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX3P48380 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
RFX3P48380 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFX3P48380 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RFX3P48380 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX3P48380 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX3P48380 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX3P48380 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms