Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MMP13P45452 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.23■□□□□ 0.83
MMP13P45452 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP13P45452 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP13P45452 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP13P45452 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MMP13P45452 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP13P45452 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
MMP13P45452 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MMP13P45452 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP13P45452 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
MMP13P45452 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP13P45452 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.22■□□□□ 0.83
MMP13P45452 UNC93B4-201ENST00000505679 747 ntBASIC20.22■□□□□ 0.83
MMP13P45452 CD99P1-205ENST00000527459 561 ntBASIC20.22■□□□□ 0.83
MMP13P45452 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
MMP13P45452 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.22■□□□□ 0.83
MMP13P45452 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.22■□□□□ 0.83
MMP13P45452 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP13P45452 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP13P45452 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
MMP13P45452 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MMP13P45452 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MMP13P45452 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MMP13P45452 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MMP13P45452 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.21■□□□□ 0.83
MMP13P45452 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.21■□□□□ 0.83
MMP13P45452 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.21■□□□□ 0.83
MMP13P45452 PHGDH-210ENST00000641115 1638 ntBASIC20.21■□□□□ 0.83
MMP13P45452 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.21■□□□□ 0.83
MMP13P45452 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.21■□□□□ 0.83
MMP13P45452 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.21■□□□□ 0.83
MMP13P45452 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.21■□□□□ 0.83
MMP13P45452 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
MMP13P45452 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
MMP13P45452 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
MMP13P45452 AC008687.6-201ENST00000596318 630 ntBASIC20.21■□□□□ 0.83
MMP13P45452 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MMP13P45452 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP13P45452 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MMP13P45452 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.21■□□□□ 0.83
MMP13P45452 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP13P45452 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.21■□□□□ 0.83
MMP13P45452 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP13P45452 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP13P45452 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP13P45452 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP13P45452 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.21■□□□□ 0.83
MMP13P45452 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
MMP13P45452 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP13P45452 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP13P45452 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP13P45452 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP13P45452 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.2■□□□□ 0.82
MMP13P45452 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
MMP13P45452 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP13P45452 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP13P45452 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP13P45452 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
MMP13P45452 RPS2P52-201ENST00000469610 820 ntBASIC20.2■□□□□ 0.82
MMP13P45452 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.2■□□□□ 0.82
MMP13P45452 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.2■□□□□ 0.82
MMP13P45452 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.2■□□□□ 0.82
MMP13P45452 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
MMP13P45452 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP13P45452 AC005082.1-201ENST00000413042 2259 ntBASIC20.2■□□□□ 0.82
MMP13P45452 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.2■□□□□ 0.82
MMP13P45452 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
MMP13P45452 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP13P45452 AL138781.2-201ENST00000617896 1843 ntBASIC20.2■□□□□ 0.82
MMP13P45452 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP13P45452 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP13P45452 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.19■□□□□ 0.82
MMP13P45452 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
MMP13P45452 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
MMP13P45452 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.19■□□□□ 0.82
MMP13P45452 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
MMP13P45452 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP13P45452 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
MMP13P45452 AC124283.5-201ENST00000624661 1809 ntBASIC20.19■□□□□ 0.82
MMP13P45452 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MMP13P45452 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP13P45452 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP13P45452 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.19■□□□□ 0.82
MMP13P45452 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MMP13P45452 AP003097.1-201ENST00000530657 1135 ntBASIC20.19■□□□□ 0.82
MMP13P45452 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MMP13P45452 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.19■□□□□ 0.82
MMP13P45452 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.19■□□□□ 0.82
MMP13P45452 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.19■□□□□ 0.82
MMP13P45452 AC120498.8-201ENST00000614275 531 ntBASIC20.19■□□□□ 0.82
MMP13P45452 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP13P45452 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
MMP13P45452 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP13P45452 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.19■□□□□ 0.82
MMP13P45452 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.19■□□□□ 0.82
MMP13P45452 AC009237.14-201ENST00000609975 1594 ntBASIC20.19■□□□□ 0.82
MMP13P45452 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.19■□□□□ 0.82
MMP13P45452 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.19■□□□□ 0.82
MMP13P45452 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms