Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A1P43005 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A1P43005 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A1P43005 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A1P43005 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC1A1P43005 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A1P43005 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A1P43005 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A1P43005 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC1A1P43005 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC1A1P43005 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A1P43005 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.37■□□□□ 0.85
SLC1A1P43005 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.37■□□□□ 0.85
SLC1A1P43005 AC004408.2-201ENST00000623613 2777 ntBASIC20.37■□□□□ 0.85
SLC1A1P43005 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A1P43005 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.37■□□□□ 0.85
SLC1A1P43005 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC1A1P43005 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A1P43005 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A1P43005 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A1P43005 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A1P43005 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A1P43005 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A1P43005 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
SLC1A1P43005 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A1P43005 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A1P43005 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC1A1P43005 KRT8P8-201ENST00000434750 1448 ntBASIC20.36■□□□□ 0.85
SLC1A1P43005 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC1A1P43005 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC1A1P43005 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC1A1P43005 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC1A1P43005 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.36■□□□□ 0.85
SLC1A1P43005 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC1A1P43005 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC1A1P43005 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
SLC1A1P43005 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.36■□□□□ 0.85
SLC1A1P43005 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.36■□□□□ 0.85
SLC1A1P43005 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC1A1P43005 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SLC1A1P43005 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC1A1P43005 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SLC1A1P43005 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC1A1P43005 TEX21P-204ENST00000641479 1693 ntBASIC20.35■□□□□ 0.85
SLC1A1P43005 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SLC1A1P43005 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A1P43005 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC1A1P43005 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC1A1P43005 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A1P43005 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
SLC1A1P43005 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SLC1A1P43005 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC1A1P43005 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC1A1P43005 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.35■□□□□ 0.85
SLC1A1P43005 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC1A1P43005 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.35■□□□□ 0.85
SLC1A1P43005 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.35■□□□□ 0.85
SLC1A1P43005 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC1A1P43005 AC120498.8-201ENST00000614275 531 ntBASIC20.35■□□□□ 0.85
SLC1A1P43005 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A1P43005 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC1A1P43005 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A1P43005 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A1P43005 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A1P43005 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SLC1A1P43005 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SLC1A1P43005 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A1P43005 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SLC1A1P43005 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SLC1A1P43005 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A1P43005 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A1P43005 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC1A1P43005 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A1P43005 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A1P43005 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A1P43005 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A1P43005 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A1P43005 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A1P43005 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SLC1A1P43005 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A1P43005 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC1A1P43005 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A1P43005 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A1P43005 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SLC1A1P43005 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A1P43005 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SLC1A1P43005 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A1P43005 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A1P43005 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
SLC1A1P43005 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC1A1P43005 AL121829.2-201ENST00000620908 328 ntBASIC20.34■□□□□ 0.85
SLC1A1P43005 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC1A1P43005 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SLC1A1P43005 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A1P43005 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SLC1A1P43005 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A1P43005 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A1P43005 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC1A1P43005 AC104417.2-201ENST00000562989 1793 ntBASIC20.34■□□□□ 0.85
SLC1A1P43005 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms