Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCNFP41002 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCNFP41002 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCNFP41002 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCNFP41002 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCNFP41002 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.57■□□□□ 0.72
CCNFP41002 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.57■□□□□ 0.72
CCNFP41002 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCNFP41002 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCNFP41002 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
CCNFP41002 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCNFP41002 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCNFP41002 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCNFP41002 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCNFP41002 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCNFP41002 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCNFP41002 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNFP41002 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNFP41002 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNFP41002 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCNFP41002 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNFP41002 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNFP41002 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNFP41002 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNFP41002 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.56■□□□□ 0.72
CCNFP41002 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.56■□□□□ 0.72
CCNFP41002 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNFP41002 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNFP41002 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNFP41002 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCNFP41002 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.55■□□□□ 0.72
CCNFP41002 CROCCP3-202ENST00000420820 1947 ntBASIC19.55■□□□□ 0.72
CCNFP41002 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.55■□□□□ 0.72
CCNFP41002 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNFP41002 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNFP41002 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNFP41002 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNFP41002 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNFP41002 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.55■□□□□ 0.72
CCNFP41002 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.55■□□□□ 0.72
CCNFP41002 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.55■□□□□ 0.72
CCNFP41002 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNFP41002 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNFP41002 AC083880.1-201ENST00000608266 535 ntBASIC19.55■□□□□ 0.72
CCNFP41002 HLA-B-256ENST00000639848 1089 ntBASIC19.55■□□□□ 0.72
CCNFP41002 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNFP41002 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
CCNFP41002 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCNFP41002 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCNFP41002 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCNFP41002 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNFP41002 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CCNFP41002 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.54■□□□□ 0.72
CCNFP41002 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNFP41002 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCNFP41002 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CCNFP41002 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNFP41002 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.54■□□□□ 0.72
CCNFP41002 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCNFP41002 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CCNFP41002 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNFP41002 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNFP41002 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.54■□□□□ 0.72
CCNFP41002 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.54■□□□□ 0.72
CCNFP41002 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CCNFP41002 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CCNFP41002 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNFP41002 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNFP41002 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCNFP41002 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.53■□□□□ 0.72
CCNFP41002 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.53■□□□□ 0.72
CCNFP41002 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CCNFP41002 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.53■□□□□ 0.72
CCNFP41002 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNFP41002 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.53■□□□□ 0.72
CCNFP41002 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNFP41002 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNFP41002 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNFP41002 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.53■□□□□ 0.72
CCNFP41002 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.53■□□□□ 0.72
CCNFP41002 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CCNFP41002 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNFP41002 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.53■□□□□ 0.72
CCNFP41002 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNFP41002 AL390719.1-204ENST00000412397 1219 ntBASIC19.53■□□□□ 0.72
CCNFP41002 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNFP41002 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.53■□□□□ 0.72
CCNFP41002 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCNFP41002 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNFP41002 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.53■□□□□ 0.72
CCNFP41002 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.53■□□□□ 0.72
CCNFP41002 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.53■□□□□ 0.72
CCNFP41002 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCNFP41002 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNFP41002 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCNFP41002 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCNFP41002 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCNFP41002 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCNFP41002 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCNFP41002 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms