Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RPL13AP40429 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RPL13AP40429 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.44□□□□□ -0.26
RPL13AP40429 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RPL13AP40429 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RPL13AP40429 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RPL13AP40429 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RPL13AP40429 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.43□□□□□ -0.26
RPL13AP40429 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RPL13AP40429 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC13.43□□□□□ -0.26
RPL13AP40429 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
RPL13AP40429 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RPL13AP40429 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC13.43□□□□□ -0.26
RPL13AP40429 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RPL13AP40429 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RPL13AP40429 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RPL13AP40429 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
RPL13AP40429 AC096631.2-201ENST00000436136 790 ntBASIC13.43□□□□□ -0.26
RPL13AP40429 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.43□□□□□ -0.26
RPL13AP40429 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RPL13AP40429 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RPL13AP40429 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC13.43□□□□□ -0.26
RPL13AP40429 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
RPL13AP40429 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
RPL13AP40429 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
RPL13AP40429 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC13.43□□□□□ -0.26
RPL13AP40429 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
RPL13AP40429 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.43□□□□□ -0.26
RPL13AP40429 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RPL13AP40429 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RPL13AP40429 PCDHB18P-201ENST00000524813 2368 ntBASIC13.43□□□□□ -0.26
RPL13AP40429 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RPL13AP40429 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RPL13AP40429 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC13.43□□□□□ -0.26
RPL13AP40429 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC13.43□□□□□ -0.26
RPL13AP40429 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC13.43□□□□□ -0.26
RPL13AP40429 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.42□□□□□ -0.26
RPL13AP40429 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 AC093484.2-201ENST00000580996 2166 ntBASIC13.42□□□□□ -0.26
RPL13AP40429 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC13.42□□□□□ -0.26
RPL13AP40429 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
RPL13AP40429 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC13.42□□□□□ -0.26
RPL13AP40429 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RPL13AP40429 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
RPL13AP40429 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC13.42□□□□□ -0.26
RPL13AP40429 AL499627.2-201ENST00000606283 725 ntBASIC13.42□□□□□ -0.26
RPL13AP40429 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC13.42□□□□□ -0.26
RPL13AP40429 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC13.42□□□□□ -0.26
RPL13AP40429 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RPL13AP40429 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
RPL13AP40429 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
RPL13AP40429 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RPL13AP40429 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RPL13AP40429 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL13AP40429 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL13AP40429 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RPL13AP40429 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
RPL13AP40429 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC13.41□□□□□ -0.26
RPL13AP40429 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL13AP40429 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL13AP40429 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RPL13AP40429 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC13.41□□□□□ -0.26
RPL13AP40429 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL13AP40429 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL13AP40429 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
RPL13AP40429 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL13AP40429 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL13AP40429 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RPL13AP40429 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RPL13AP40429 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC13.41□□□□□ -0.26
RPL13AP40429 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC13.41□□□□□ -0.26
RPL13AP40429 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RPL13AP40429 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC13.41□□□□□ -0.26
RPL13AP40429 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL13AP40429 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL13AP40429 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms