Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CDKN1AP38936 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKN1AP38936 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKN1AP38936 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKN1AP38936 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CDKN1AP38936 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKN1AP38936 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDKN1AP38936 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CDKN1AP38936 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CDKN1AP38936 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.6■□□□□ 0.25
CDKN1AP38936 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CDKN1AP38936 AP005242.2-201ENST00000580065 1175 ntBASIC16.6■□□□□ 0.25
CDKN1AP38936 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.6■□□□□ 0.25
CDKN1AP38936 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKN1AP38936 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CDKN1AP38936 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKN1AP38936 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CDKN1AP38936 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKN1AP38936 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKN1AP38936 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDKN1AP38936 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CDKN1AP38936 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CDKN1AP38936 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.6■□□□□ 0.25
CDKN1AP38936 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.6■□□□□ 0.25
CDKN1AP38936 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKN1AP38936 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKN1AP38936 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDKN1AP38936 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKN1AP38936 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKN1AP38936 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.59■□□□□ 0.25
CDKN1AP38936 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKN1AP38936 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDKN1AP38936 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.59■□□□□ 0.25
CDKN1AP38936 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.59■□□□□ 0.25
CDKN1AP38936 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDKN1AP38936 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.59■□□□□ 0.25
CDKN1AP38936 DUX4L26-201ENST00000489078 1255 ntBASIC16.59■□□□□ 0.25
CDKN1AP38936 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKN1AP38936 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.59■□□□□ 0.25
CDKN1AP38936 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CDKN1AP38936 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKN1AP38936 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKN1AP38936 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CDKN1AP38936 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDKN1AP38936 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDKN1AP38936 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CDKN1AP38936 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKN1AP38936 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.59■□□□□ 0.25
CDKN1AP38936 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CDKN1AP38936 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.59■□□□□ 0.25
CDKN1AP38936 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
CDKN1AP38936 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDKN1AP38936 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKN1AP38936 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDKN1AP38936 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.58■□□□□ 0.25
CDKN1AP38936 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CDKN1AP38936 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.58■□□□□ 0.24
CDKN1AP38936 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CDKN1AP38936 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.58■□□□□ 0.24
CDKN1AP38936 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CDKN1AP38936 AC104076.2-201ENST00000448912 469 ntBASIC16.58■□□□□ 0.24
CDKN1AP38936 EGLN1P1-201ENST00000531623 762 ntBASIC16.58■□□□□ 0.24
CDKN1AP38936 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDKN1AP38936 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.58■□□□□ 0.24
CDKN1AP38936 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDKN1AP38936 AC011298.2-201ENST00000617989 482 ntBASIC16.58■□□□□ 0.24
CDKN1AP38936 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDKN1AP38936 HLA-A-209ENST00000638375 975 ntBASIC16.58■□□□□ 0.24
CDKN1AP38936 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDKN1AP38936 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDKN1AP38936 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDKN1AP38936 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDKN1AP38936 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.58■□□□□ 0.24
CDKN1AP38936 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDKN1AP38936 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDKN1AP38936 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDKN1AP38936 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CDKN1AP38936 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDKN1AP38936 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDKN1AP38936 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDKN1AP38936 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.58■□□□□ 0.24
CDKN1AP38936 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.57■□□□□ 0.24
CDKN1AP38936 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.57■□□□□ 0.24
CDKN1AP38936 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.57■□□□□ 0.24
CDKN1AP38936 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.57■□□□□ 0.24
CDKN1AP38936 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDKN1AP38936 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CDKN1AP38936 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.57■□□□□ 0.24
CDKN1AP38936 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.57■□□□□ 0.24
CDKN1AP38936 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CDKN1AP38936 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDKN1AP38936 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDKN1AP38936 RCC2P6-201ENST00000526625 1557 ntBASIC16.57■□□□□ 0.24
CDKN1AP38936 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDKN1AP38936 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDKN1AP38936 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.57■□□□□ 0.24
CDKN1AP38936 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDKN1AP38936 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDKN1AP38936 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDKN1AP38936 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms