Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 HTR7P1-201ENST00000538670 1336 ntBASIC19.41■□□□□ 0.7
HMGCLP35914 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
HMGCLP35914 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCLP35914 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
HMGCLP35914 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HMGCLP35914 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCLP35914 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.41■□□□□ 0.7
HMGCLP35914 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCLP35914 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.4■□□□□ 0.7
HMGCLP35914 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.4■□□□□ 0.7
HMGCLP35914 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.4■□□□□ 0.7
HMGCLP35914 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HMGCLP35914 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCLP35914 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCLP35914 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCLP35914 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.4■□□□□ 0.7
HMGCLP35914 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCLP35914 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.4■□□□□ 0.7
HMGCLP35914 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
HMGCLP35914 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCLP35914 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.4■□□□□ 0.7
HMGCLP35914 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.4■□□□□ 0.7
HMGCLP35914 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
HMGCLP35914 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCLP35914 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HMGCLP35914 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCLP35914 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCLP35914 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.4■□□□□ 0.7
HMGCLP35914 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCLP35914 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCLP35914 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCLP35914 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCLP35914 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCLP35914 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCLP35914 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCLP35914 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HMGCLP35914 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCLP35914 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.39■□□□□ 0.69
HMGCLP35914 AC093484.2-201ENST00000580996 2166 ntBASIC19.39■□□□□ 0.69
HMGCLP35914 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCLP35914 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCLP35914 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HMGCLP35914 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCLP35914 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
HMGCLP35914 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.39■□□□□ 0.69
HMGCLP35914 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.39■□□□□ 0.69
HMGCLP35914 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HMGCLP35914 HLA-A-209ENST00000638375 975 ntBASIC19.39■□□□□ 0.69
HMGCLP35914 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.39■□□□□ 0.69
HMGCLP35914 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCLP35914 AL135905.2-201ENST00000584934 1404 ntBASIC19.39■□□□□ 0.69
HMGCLP35914 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCLP35914 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCLP35914 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCLP35914 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCLP35914 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCLP35914 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCLP35914 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HMGCLP35914 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.39■□□□□ 0.69
HMGCLP35914 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCLP35914 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCLP35914 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HMGCLP35914 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCLP35914 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.39■□□□□ 0.69
HMGCLP35914 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCLP35914 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
HMGCLP35914 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HMGCLP35914 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.38■□□□□ 0.69
HMGCLP35914 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCLP35914 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCLP35914 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCLP35914 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.38■□□□□ 0.69
HMGCLP35914 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HMGCLP35914 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.38■□□□□ 0.69
HMGCLP35914 NIFKP9-201ENST00000419265 221 ntBASIC19.38■□□□□ 0.69
HMGCLP35914 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCLP35914 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HMGCLP35914 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCLP35914 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.38■□□□□ 0.69
HMGCLP35914 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCLP35914 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.38■□□□□ 0.69
HMGCLP35914 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.38■□□□□ 0.69
HMGCLP35914 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.38■□□□□ 0.69
HMGCLP35914 AC104417.2-201ENST00000562989 1793 ntBASIC19.38■□□□□ 0.69
HMGCLP35914 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
HMGCLP35914 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCLP35914 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCLP35914 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCLP35914 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.38■□□□□ 0.69
HMGCLP35914 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCLP35914 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCLP35914 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCLP35914 Z82202.1-201ENST00000623446 1880 ntBASIC19.37■□□□□ 0.69
HMGCLP35914 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.37■□□□□ 0.69
HMGCLP35914 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.37■□□□□ 0.69
HMGCLP35914 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCLP35914 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.37■□□□□ 0.69
HMGCLP35914 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCLP35914 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCLP35914 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms