Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VARSP26640 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VARSP26640 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VARSP26640 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VARSP26640 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VARSP26640 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
VARSP26640 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.09■□□□□ 0.65
VARSP26640 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VARSP26640 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VARSP26640 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.09■□□□□ 0.65
VARSP26640 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VARSP26640 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.09■□□□□ 0.65
VARSP26640 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
VARSP26640 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.09■□□□□ 0.65
VARSP26640 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
VARSP26640 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.09■□□□□ 0.65
VARSP26640 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.09■□□□□ 0.65
VARSP26640 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
VARSP26640 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VARSP26640 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VARSP26640 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VARSP26640 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.09■□□□□ 0.65
VARSP26640 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.09■□□□□ 0.65
VARSP26640 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
VARSP26640 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
VARSP26640 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VARSP26640 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
VARSP26640 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VARSP26640 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.08■□□□□ 0.65
VARSP26640 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.08■□□□□ 0.65
VARSP26640 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VARSP26640 AC009237.14-201ENST00000609975 1594 ntBASIC19.08■□□□□ 0.65
VARSP26640 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VARSP26640 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.08■□□□□ 0.64
VARSP26640 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.08■□□□□ 0.64
VARSP26640 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
VARSP26640 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.08■□□□□ 0.64
VARSP26640 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.08■□□□□ 0.64
VARSP26640 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.08■□□□□ 0.64
VARSP26640 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
VARSP26640 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.08■□□□□ 0.64
VARSP26640 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.08■□□□□ 0.64
VARSP26640 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.08■□□□□ 0.64
VARSP26640 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
VARSP26640 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.08■□□□□ 0.64
VARSP26640 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
VARSP26640 AP000974.1-201ENST00000623909 2387 ntBASIC19.08■□□□□ 0.64
VARSP26640 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
VARSP26640 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VARSP26640 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VARSP26640 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
VARSP26640 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VARSP26640 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
VARSP26640 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VARSP26640 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.08■□□□□ 0.64
VARSP26640 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.07■□□□□ 0.64
VARSP26640 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VARSP26640 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VARSP26640 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VARSP26640 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VARSP26640 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.07■□□□□ 0.64
VARSP26640 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
VARSP26640 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VARSP26640 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.07■□□□□ 0.64
VARSP26640 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.07■□□□□ 0.64
VARSP26640 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VARSP26640 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.07■□□□□ 0.64
VARSP26640 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
VARSP26640 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
VARSP26640 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.07■□□□□ 0.64
VARSP26640 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VARSP26640 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VARSP26640 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
VARSP26640 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VARSP26640 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VARSP26640 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.07■□□□□ 0.64
VARSP26640 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VARSP26640 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VARSP26640 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.07■□□□□ 0.64
VARSP26640 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VARSP26640 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.07■□□□□ 0.64
VARSP26640 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.07■□□□□ 0.64
VARSP26640 TNXA-203ENST00000507684 2038 ntBASIC19.07■□□□□ 0.64
VARSP26640 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VARSP26640 AP001271.2-201ENST00000624018 1556 ntBASIC19.06■□□□□ 0.64
VARSP26640 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VARSP26640 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VARSP26640 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VARSP26640 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VARSP26640 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.06■□□□□ 0.64
VARSP26640 AC018553.1-201ENST00000616682 1458 ntBASIC19.06■□□□□ 0.64
VARSP26640 AL596275.1-201ENST00000423464 877 ntBASIC19.06■□□□□ 0.64
VARSP26640 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.06■□□□□ 0.64
VARSP26640 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.06■□□□□ 0.64
VARSP26640 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VARSP26640 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.06■□□□□ 0.64
VARSP26640 SOX15-203ENST00000570788 1093 ntBASIC19.06■□□□□ 0.64
VARSP26640 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
VARSP26640 AC005332.7-201ENST00000614046 2005 ntBASIC19.06■□□□□ 0.64
VARSP26640 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms