Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.67■□□□□ 0.58
PTX3P26022 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.67■□□□□ 0.58
PTX3P26022 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.67■□□□□ 0.58
PTX3P26022 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTX3P26022 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.67■□□□□ 0.58
PTX3P26022 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.67■□□□□ 0.58
PTX3P26022 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTX3P26022 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PTX3P26022 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.66■□□□□ 0.58
PTX3P26022 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PTX3P26022 AC005332.7-201ENST00000614046 2005 ntBASIC18.66■□□□□ 0.58
PTX3P26022 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PTX3P26022 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTX3P26022 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTX3P26022 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
PTX3P26022 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTX3P26022 PRKY-204ENST00000533551 1019 ntBASIC18.66■□□□□ 0.58
PTX3P26022 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.66■□□□□ 0.58
PTX3P26022 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTX3P26022 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.66■□□□□ 0.58
PTX3P26022 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.66■□□□□ 0.58
PTX3P26022 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTX3P26022 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTX3P26022 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTX3P26022 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTX3P26022 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTX3P26022 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTX3P26022 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.66■□□□□ 0.58
PTX3P26022 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
PTX3P26022 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTX3P26022 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTX3P26022 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTX3P26022 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTX3P26022 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.65■□□□□ 0.58
PTX3P26022 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTX3P26022 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTX3P26022 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTX3P26022 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTX3P26022 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PTX3P26022 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTX3P26022 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.65■□□□□ 0.58
PTX3P26022 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
PTX3P26022 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.65■□□□□ 0.58
PTX3P26022 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.65■□□□□ 0.58
PTX3P26022 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTX3P26022 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTX3P26022 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.65■□□□□ 0.58
PTX3P26022 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTX3P26022 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTX3P26022 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTX3P26022 KRT8P8-201ENST00000434750 1448 ntBASIC18.65■□□□□ 0.58
PTX3P26022 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.65■□□□□ 0.58
PTX3P26022 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.65■□□□□ 0.58
PTX3P26022 AC087289.5-201ENST00000586076 3175 ntBASIC18.65■□□□□ 0.58
PTX3P26022 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
PTX3P26022 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.64■□□□□ 0.58
PTX3P26022 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PTX3P26022 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTX3P26022 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTX3P26022 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTX3P26022 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTX3P26022 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.64■□□□□ 0.57
PTX3P26022 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTX3P26022 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.64■□□□□ 0.57
PTX3P26022 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.64■□□□□ 0.57
PTX3P26022 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.64■□□□□ 0.57
PTX3P26022 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.64■□□□□ 0.57
PTX3P26022 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTX3P26022 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTX3P26022 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTX3P26022 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTX3P26022 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTX3P26022 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTX3P26022 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTX3P26022 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTX3P26022 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTX3P26022 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTX3P26022 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTX3P26022 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTX3P26022 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PTX3P26022 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PTX3P26022 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.63■□□□□ 0.57
PTX3P26022 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTX3P26022 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTX3P26022 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PTX3P26022 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTX3P26022 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTX3P26022 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.63■□□□□ 0.57
PTX3P26022 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.63■□□□□ 0.57
PTX3P26022 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.63■□□□□ 0.57
PTX3P26022 TUBB8P6-201ENST00000436895 1288 ntBASIC18.63■□□□□ 0.57
PTX3P26022 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.63■□□□□ 0.57
PTX3P26022 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTX3P26022 KRT18P16-201ENST00000510337 1294 ntBASIC18.63■□□□□ 0.57
PTX3P26022 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.63■□□□□ 0.57
PTX3P26022 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.63■□□□□ 0.57
PTX3P26022 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTX3P26022 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PTX3P26022 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.63■□□□□ 0.57
PTX3P26022 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms