Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.49■□□□□ 0.55
MMP11P24347 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MMP11P24347 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP11P24347 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP11P24347 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.49■□□□□ 0.55
MMP11P24347 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.49■□□□□ 0.55
MMP11P24347 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.49■□□□□ 0.55
MMP11P24347 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.49■□□□□ 0.55
MMP11P24347 AL355075.4-201ENST00000554988 638 ntBASIC18.49■□□□□ 0.55
MMP11P24347 AP003071.4-201ENST00000562276 1284 ntBASIC18.49■□□□□ 0.55
MMP11P24347 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
MMP11P24347 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP11P24347 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
MMP11P24347 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP11P24347 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP11P24347 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MMP11P24347 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP11P24347 AP006587.1-201ENST00000534129 1502 ntBASIC18.49■□□□□ 0.55
MMP11P24347 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MMP11P24347 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
MMP11P24347 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP11P24347 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.48■□□□□ 0.55
MMP11P24347 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP11P24347 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP11P24347 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP11P24347 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
MMP11P24347 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MMP11P24347 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP11P24347 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP11P24347 FAM197Y1-201ENST00000421178 764 ntBASIC18.48■□□□□ 0.55
MMP11P24347 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.48■□□□□ 0.55
MMP11P24347 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
MMP11P24347 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.48■□□□□ 0.55
MMP11P24347 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MMP11P24347 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP11P24347 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.48■□□□□ 0.55
MMP11P24347 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
MMP11P24347 AL158211.5-201ENST00000623583 2518 ntBASIC18.48■□□□□ 0.55
MMP11P24347 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MMP11P24347 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.48■□□□□ 0.55
MMP11P24347 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MMP11P24347 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.48■□□□□ 0.55
MMP11P24347 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.48■□□□□ 0.55
MMP11P24347 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP11P24347 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP11P24347 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP11P24347 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MMP11P24347 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MMP11P24347 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.47■□□□□ 0.55
MMP11P24347 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.47■□□□□ 0.55
MMP11P24347 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.47■□□□□ 0.55
MMP11P24347 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP11P24347 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP11P24347 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP11P24347 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.47■□□□□ 0.55
MMP11P24347 ECEL1P3-201ENST00000427961 737 ntBASIC18.47■□□□□ 0.55
MMP11P24347 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.47■□□□□ 0.55
MMP11P24347 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.47■□□□□ 0.55
MMP11P24347 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.47■□□□□ 0.55
MMP11P24347 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MMP11P24347 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
MMP11P24347 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.47■□□□□ 0.55
MMP11P24347 LINC01023-201ENST00000606054 436 ntBASIC18.47■□□□□ 0.55
MMP11P24347 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.47■□□□□ 0.55
MMP11P24347 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.47■□□□□ 0.55
MMP11P24347 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP11P24347 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP11P24347 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.47■□□□□ 0.55
MMP11P24347 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP11P24347 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP11P24347 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
MMP11P24347 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP11P24347 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP11P24347 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MMP11P24347 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.46■□□□□ 0.55
MMP11P24347 AC116562.4-201ENST00000641316 2276 ntBASIC18.46■□□□□ 0.55
MMP11P24347 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.46■□□□□ 0.55
MMP11P24347 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
MMP11P24347 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP11P24347 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP11P24347 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MMP11P24347 TSPY15P-201ENST00000457163 923 ntBASIC18.46■□□□□ 0.55
MMP11P24347 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.46■□□□□ 0.55
MMP11P24347 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.46■□□□□ 0.55
MMP11P24347 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.46■□□□□ 0.55
MMP11P24347 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
MMP11P24347 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP11P24347 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP11P24347 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP11P24347 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MMP11P24347 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP11P24347 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP11P24347 TFP1-202ENST00000475455 1573 ntBASIC18.46■□□□□ 0.55
MMP11P24347 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP11P24347 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.46■□□□□ 0.55
MMP11P24347 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP11P24347 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP11P24347 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
MMP11P24347 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
MMP11P24347 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms