Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRPH2P23942 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRPH2P23942 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRPH2P23942 AC069152.1-201ENST00000438030 544 ntBASIC18.54■□□□□ 0.56
PRPH2P23942 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
PRPH2P23942 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.54■□□□□ 0.56
PRPH2P23942 AC142086.2-201ENST00000569753 217 ntBASIC18.54■□□□□ 0.56
PRPH2P23942 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRPH2P23942 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.54■□□□□ 0.56
PRPH2P23942 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.54■□□□□ 0.56
PRPH2P23942 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.54■□□□□ 0.56
PRPH2P23942 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRPH2P23942 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
PRPH2P23942 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PRPH2P23942 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.54■□□□□ 0.56
PRPH2P23942 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRPH2P23942 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRPH2P23942 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRPH2P23942 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PRPH2P23942 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.53■□□□□ 0.56
PRPH2P23942 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRPH2P23942 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRPH2P23942 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
PRPH2P23942 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRPH2P23942 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRPH2P23942 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.53■□□□□ 0.56
PRPH2P23942 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PRPH2P23942 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRPH2P23942 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.53■□□□□ 0.56
PRPH2P23942 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.53■□□□□ 0.56
PRPH2P23942 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRPH2P23942 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.53■□□□□ 0.56
PRPH2P23942 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRPH2P23942 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRPH2P23942 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRPH2P23942 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRPH2P23942 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRPH2P23942 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRPH2P23942 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.53■□□□□ 0.56
PRPH2P23942 AC008687.6-201ENST00000596318 630 ntBASIC18.53■□□□□ 0.56
PRPH2P23942 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.53■□□□□ 0.56
PRPH2P23942 AL109923.1-201ENST00000618799 583 ntBASIC18.53■□□□□ 0.56
PRPH2P23942 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRPH2P23942 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRPH2P23942 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.53■□□□□ 0.56
PRPH2P23942 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.53■□□□□ 0.56
PRPH2P23942 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PRPH2P23942 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRPH2P23942 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
PRPH2P23942 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.52■□□□□ 0.56
PRPH2P23942 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
PRPH2P23942 SDHAP1-207ENST00000440850 2000 ntBASIC18.52■□□□□ 0.56
PRPH2P23942 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.52■□□□□ 0.56
PRPH2P23942 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRPH2P23942 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRPH2P23942 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.52■□□□□ 0.56
PRPH2P23942 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PRPH2P23942 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRPH2P23942 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRPH2P23942 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRPH2P23942 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRPH2P23942 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
PRPH2P23942 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.52■□□□□ 0.56
PRPH2P23942 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.52■□□□□ 0.56
PRPH2P23942 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.52■□□□□ 0.56
PRPH2P23942 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.52■□□□□ 0.56
PRPH2P23942 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRPH2P23942 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.52■□□□□ 0.56
PRPH2P23942 SOX15-203ENST00000570788 1093 ntBASIC18.52■□□□□ 0.56
PRPH2P23942 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
PRPH2P23942 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
PRPH2P23942 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRPH2P23942 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PRPH2P23942 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.52■□□□□ 0.55
PRPH2P23942 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
PRPH2P23942 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRPH2P23942 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRPH2P23942 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRPH2P23942 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRPH2P23942 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.51■□□□□ 0.55
PRPH2P23942 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
PRPH2P23942 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRPH2P23942 TUBB8P6-201ENST00000436895 1288 ntBASIC18.51■□□□□ 0.55
PRPH2P23942 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PRPH2P23942 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRPH2P23942 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.51■□□□□ 0.55
PRPH2P23942 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRPH2P23942 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRPH2P23942 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PRPH2P23942 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRPH2P23942 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRPH2P23942 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRPH2P23942 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRPH2P23942 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRPH2P23942 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PRPH2P23942 CROCCP3-202ENST00000420820 1947 ntBASIC18.51■□□□□ 0.55
PRPH2P23942 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PRPH2P23942 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PRPH2P23942 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PRPH2P23942 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms