Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
XPAP23025 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
XPAP23025 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
XPAP23025 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
XPAP23025 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
XPAP23025 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
XPAP23025 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
XPAP23025 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
XPAP23025 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
XPAP23025 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
XPAP23025 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
XPAP23025 AL355355.2-201ENST00000442321 338 ntBASIC19.65■□□□□ 0.74
XPAP23025 KSR1P1-201ENST00000446298 240 ntBASIC19.65■□□□□ 0.74
XPAP23025 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
XPAP23025 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
XPAP23025 AL353708.3-201ENST00000610272 989 ntBASIC19.65■□□□□ 0.74
XPAP23025 CR392000.1-201ENST00000624770 1228 ntBASIC19.65■□□□□ 0.74
XPAP23025 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
XPAP23025 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
XPAP23025 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
XPAP23025 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
XPAP23025 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
XPAP23025 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
XPAP23025 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
XPAP23025 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
XPAP23025 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
XPAP23025 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
XPAP23025 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.64■□□□□ 0.74
XPAP23025 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
XPAP23025 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
XPAP23025 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
XPAP23025 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
XPAP23025 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
XPAP23025 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
XPAP23025 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
XPAP23025 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
XPAP23025 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
XPAP23025 NIFKP9-201ENST00000419265 221 ntBASIC19.64■□□□□ 0.73
XPAP23025 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
XPAP23025 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
XPAP23025 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.64■□□□□ 0.73
XPAP23025 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
XPAP23025 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.64■□□□□ 0.73
XPAP23025 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
XPAP23025 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
XPAP23025 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
XPAP23025 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.64■□□□□ 0.73
XPAP23025 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
XPAP23025 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
XPAP23025 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
XPAP23025 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
XPAP23025 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
XPAP23025 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
XPAP23025 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
XPAP23025 TCF3P1-201ENST00000423021 1937 ntBASIC19.63■□□□□ 0.73
XPAP23025 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
XPAP23025 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
XPAP23025 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
XPAP23025 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
XPAP23025 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.63■□□□□ 0.73
XPAP23025 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.63■□□□□ 0.73
XPAP23025 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
XPAP23025 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
XPAP23025 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
XPAP23025 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
XPAP23025 AC112907.3-201ENST00000577781 2400 ntBASIC19.63■□□□□ 0.73
XPAP23025 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
XPAP23025 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.63■□□□□ 0.73
XPAP23025 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
XPAP23025 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
XPAP23025 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
XPAP23025 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
XPAP23025 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
XPAP23025 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
XPAP23025 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
XPAP23025 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.62■□□□□ 0.73
XPAP23025 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
XPAP23025 KRT16P1-201ENST00000399124 1418 ntBASIC19.62■□□□□ 0.73
XPAP23025 KRT8P8-201ENST00000434750 1448 ntBASIC19.62■□□□□ 0.73
XPAP23025 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
XPAP23025 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
XPAP23025 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
XPAP23025 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
XPAP23025 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
XPAP23025 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.62■□□□□ 0.73
XPAP23025 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.62■□□□□ 0.73
XPAP23025 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.62■□□□□ 0.73
XPAP23025 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.62■□□□□ 0.73
XPAP23025 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.62■□□□□ 0.73
XPAP23025 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.62■□□□□ 0.73
XPAP23025 AC026471.5-201ENST00000615068 467 ntBASIC19.62■□□□□ 0.73
XPAP23025 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.62■□□□□ 0.73
XPAP23025 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
XPAP23025 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
XPAP23025 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
XPAP23025 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.62■□□□□ 0.73
XPAP23025 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.62■□□□□ 0.73
XPAP23025 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
XPAP23025 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
XPAP23025 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms