Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN3P20807 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN3P20807 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.71■□□□□ 0.59
CAPN3P20807 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.71■□□□□ 0.59
CAPN3P20807 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN3P20807 AL049812.1-201ENST00000432563 2267 ntBASIC18.71■□□□□ 0.59
CAPN3P20807 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.71■□□□□ 0.59
CAPN3P20807 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN3P20807 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CAPN3P20807 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN3P20807 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CAPN3P20807 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN3P20807 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
CAPN3P20807 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.71■□□□□ 0.59
CAPN3P20807 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.71■□□□□ 0.59
CAPN3P20807 CYP2T3P-201ENST00000601990 817 ntBASIC18.71■□□□□ 0.59
CAPN3P20807 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN3P20807 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.71■□□□□ 0.59
CAPN3P20807 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.71■□□□□ 0.59
CAPN3P20807 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
CAPN3P20807 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CAPN3P20807 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN3P20807 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CAPN3P20807 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CAPN3P20807 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.71■□□□□ 0.59
CAPN3P20807 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN3P20807 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN3P20807 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN3P20807 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN3P20807 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN3P20807 AL355472.2-201ENST00000422958 438 ntBASIC18.7■□□□□ 0.58
CAPN3P20807 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.7■□□□□ 0.58
CAPN3P20807 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.7■□□□□ 0.58
CAPN3P20807 AC105036.2-201ENST00000569468 176 ntBASIC18.7■□□□□ 0.58
CAPN3P20807 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CAPN3P20807 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CAPN3P20807 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN3P20807 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.7■□□□□ 0.58
CAPN3P20807 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN3P20807 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN3P20807 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN3P20807 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN3P20807 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN3P20807 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN3P20807 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN3P20807 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN3P20807 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.69■□□□□ 0.58
CAPN3P20807 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CAPN3P20807 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.69■□□□□ 0.58
CAPN3P20807 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN3P20807 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN3P20807 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN3P20807 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CAPN3P20807 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CAPN3P20807 AC023632.3-201ENST00000521633 145 ntBASIC18.69■□□□□ 0.58
CAPN3P20807 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.69■□□□□ 0.58
CAPN3P20807 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.69■□□□□ 0.58
CAPN3P20807 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CAPN3P20807 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN3P20807 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN3P20807 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN3P20807 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN3P20807 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.69■□□□□ 0.58
CAPN3P20807 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN3P20807 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.69■□□□□ 0.58
CAPN3P20807 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CAPN3P20807 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN3P20807 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN3P20807 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.68■□□□□ 0.58
CAPN3P20807 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN3P20807 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.68■□□□□ 0.58
CAPN3P20807 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN3P20807 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CAPN3P20807 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN3P20807 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN3P20807 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN3P20807 PRORSD1P-201ENST00000295112 541 ntBASIC18.68■□□□□ 0.58
CAPN3P20807 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN3P20807 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN3P20807 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN3P20807 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN3P20807 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.68■□□□□ 0.58
CAPN3P20807 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.68■□□□□ 0.58
CAPN3P20807 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.68■□□□□ 0.58
CAPN3P20807 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN3P20807 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN3P20807 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.68■□□□□ 0.58
CAPN3P20807 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN3P20807 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN3P20807 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CAPN3P20807 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CAPN3P20807 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CAPN3P20807 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.68■□□□□ 0.58
CAPN3P20807 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CAPN3P20807 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CAPN3P20807 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN3P20807 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
CAPN3P20807 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN3P20807 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.67■□□□□ 0.58
CAPN3P20807 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms